Gene : Glyma.04G247200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Genomic Order:  2472
Name:  ? Glyma.04G247200 Secondary Identifier:  ? PAC:30487506
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G247200 0.5kb upstream 0.5kb upstream 8012 true Chr04: 51433530-51441541 Glycine max
Glyma.04G247200 0.5kb upstream 0.5kb upstream 500 false Chr04: 51441042-51441541 Glycine max
Glyma.04G247200 0.5kb downstream 0.5kb downstream 8012 true Chr04: 51433030-51441041 Glycine max
Glyma.04G247200 0.5kb downstream 0.5kb downstream 500 false Chr04: 51433030-51433529 Glycine max
Glyma.04G247200 1.0kb upstream 1.0kb upstream 8512 true Chr04: 51433530-51442041 Glycine max
Glyma.04G247200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51441042-51442041 Glycine max
Glyma.04G247200 1.0kb downstream 1.0kb downstream 8512 true Chr04: 51432530-51441041 Glycine max
Glyma.04G247200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51432530-51433529 Glycine max
Glyma.04G247200 2.0kb upstream 2.0kb upstream 9512 true Chr04: 51433530-51443041 Glycine max
Glyma.04G247200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51441042-51443041 Glycine max
Glyma.04G247200 2.0kb downstream 2.0kb downstream 9512 true Chr04: 51431530-51441041 Glycine max
Glyma.04G247200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51431530-51433529 Glycine max
Glyma.04G247200 5.0kb upstream 5.0kb upstream 12512 true Chr04: 51433530-51446041 Glycine max
Glyma.04G247200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51441042-51446041 Glycine max
Glyma.04G247200 5.0kb downstream 5.0kb downstream 12512 true Chr04: 51428530-51441041 Glycine max
Glyma.04G247200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51428530-51433529 Glycine max
Glyma.04G247200 10.0kb upstream 10.0kb upstream 17512 true Chr04: 51433530-51451041 Glycine max
Glyma.04G247200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51441042-51451041 Glycine max
Glyma.04G247200 10.0kb downstream 10.0kb downstream 17512 true Chr04: 51423530-51441041 Glycine max
Glyma.04G247200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51423530-51433529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303611 5265 Fabidae View MSA
124050406 5270 Rosid View MSA
123746248 5271 Pentapetalae View MSA
122789613 5272 Eudicot View MSA
122042836 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.6868 0.0 25.8436    
cufflinks 9.93292 0.0 26.4999    
cufflinks 9.92442 0.0 26.4771    
cufflinks 9.05429 0.0 24.1673    
cufflinks 5.81422 0.0 15.7281   Low
cufflinks 4.98549 0.0 13.6164   Low
cufflinks 8.66701 0.0 23.1446    
cufflinks 6.70269 0.0 18.0228    
cufflinks 5.9513 0.0 16.0883    
cufflinks 3.029        
cufflinks 2.009       Low
cufflinks 4.765        
cufflinks 2.437        
cufflinks 2.815        
cufflinks 2.737        
cufflinks 4.386        
cufflinks 2.18       Low
cufflinks 4.605        
cufflinks 5.327       High
cufflinks 4.858        
cufflinks 1.867       Low
cufflinks 4.897       High
cufflinks 5.185       High
cufflinks 2.091       Low
cufflinks 4.788        
cufflinks 2.33        

0 Strain