Gene : Glyma.19G183900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31374:SF16 - AUXIN-RESPONSIVE FAMILY PROTEIN Genomic Order:  1839
Name:  ? Glyma.19G183900 Secondary Identifier:  ? PAC:30515164
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G183900 0.5kb upstream 0.5kb upstream 1047 true Chr19: 44238670-44239716 Glycine max
Glyma.19G183900 0.5kb upstream 0.5kb upstream 500 false Chr19: 44239217-44239716 Glycine max
Glyma.19G183900 0.5kb downstream 0.5kb downstream 1047 true Chr19: 44238170-44239216 Glycine max
Glyma.19G183900 0.5kb downstream 0.5kb downstream 500 false Chr19: 44238170-44238669 Glycine max
Glyma.19G183900 1.0kb upstream 1.0kb upstream 1547 true Chr19: 44238670-44240216 Glycine max
Glyma.19G183900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44239217-44240216 Glycine max
Glyma.19G183900 1.0kb downstream 1.0kb downstream 1547 true Chr19: 44237670-44239216 Glycine max
Glyma.19G183900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44237670-44238669 Glycine max
Glyma.19G183900 2.0kb upstream 2.0kb upstream 2547 true Chr19: 44238670-44241216 Glycine max
Glyma.19G183900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44239217-44241216 Glycine max
Glyma.19G183900 2.0kb downstream 2.0kb downstream 2547 true Chr19: 44236670-44239216 Glycine max
Glyma.19G183900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44236670-44238669 Glycine max
Glyma.19G183900 5.0kb upstream 5.0kb upstream 5547 true Chr19: 44238670-44244216 Glycine max
Glyma.19G183900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44239217-44244216 Glycine max
Glyma.19G183900 5.0kb downstream 5.0kb downstream 5547 true Chr19: 44233670-44239216 Glycine max
Glyma.19G183900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44233670-44238669 Glycine max
Glyma.19G183900 10.0kb upstream 10.0kb upstream 10547 true Chr19: 44238670-44249216 Glycine max
Glyma.19G183900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44239217-44249216 Glycine max
Glyma.19G183900 10.0kb downstream 10.0kb downstream 10547 true Chr19: 44228670-44239216 Glycine max
Glyma.19G183900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44228670-44238669 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656979 5273 Angiosperm View MSA
122296782 5265 Fabidae View MSA
124037900 5270 Rosid View MSA
123610557 5271 Pentapetalae View MSA
122645167 5272 Eudicot View MSA
120929034 5274 Embryophyte View MSA
122969612 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.516698 0.0 2.02511    
cufflinks 0.270074 0.0 1.08534    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.48329 0.0 1.90193    
cufflinks 0.0491317 0.0 0.222368 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.141        
cufflinks 0.949        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.949        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 9.072     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07        
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain