Gene : Glyma.04G251500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  2515
Name:  ? Glyma.04G251500 Secondary Identifier:  ? PAC:30489387
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G251500 0.5kb upstream 0.5kb upstream 4659 true Chr04: 51829394-51834052 Glycine max
Glyma.04G251500 0.5kb upstream 0.5kb upstream 500 false Chr04: 51829394-51829893 Glycine max
Glyma.04G251500 0.5kb downstream 0.5kb downstream 4659 true Chr04: 51829894-51834552 Glycine max
Glyma.04G251500 0.5kb downstream 0.5kb downstream 500 false Chr04: 51834053-51834552 Glycine max
Glyma.04G251500 1.0kb upstream 1.0kb upstream 5159 true Chr04: 51828894-51834052 Glycine max
Glyma.04G251500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51828894-51829893 Glycine max
Glyma.04G251500 1.0kb downstream 1.0kb downstream 5159 true Chr04: 51829894-51835052 Glycine max
Glyma.04G251500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51834053-51835052 Glycine max
Glyma.04G251500 2.0kb upstream 2.0kb upstream 6159 true Chr04: 51827894-51834052 Glycine max
Glyma.04G251500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51827894-51829893 Glycine max
Glyma.04G251500 2.0kb downstream 2.0kb downstream 6159 true Chr04: 51829894-51836052 Glycine max
Glyma.04G251500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51834053-51836052 Glycine max
Glyma.04G251500 5.0kb upstream 5.0kb upstream 9159 true Chr04: 51824894-51834052 Glycine max
Glyma.04G251500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51824894-51829893 Glycine max
Glyma.04G251500 5.0kb downstream 5.0kb downstream 9159 true Chr04: 51829894-51839052 Glycine max
Glyma.04G251500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51834053-51839052 Glycine max
Glyma.04G251500 10.0kb upstream 10.0kb upstream 14159 true Chr04: 51819894-51834052 Glycine max
Glyma.04G251500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51819894-51829893 Glycine max
Glyma.04G251500 10.0kb downstream 10.0kb downstream 14159 true Chr04: 51829894-51844052 Glycine max
Glyma.04G251500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51834053-51844052 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304964 5265 Fabidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48078 0.0 5.41479   High
cufflinks 0.528034 0.0 2.02653    
cufflinks 0.908754 0.0 3.39946    
cufflinks 0.207291 0.0 0.824235   Low
cufflinks 0.824254 0.0 3.10045    
cufflinks 1.05242 0.0 3.91473    
cufflinks 0.360095 0.0 1.404    
cufflinks 0.373427 0.0 1.45293    
cufflinks 0.732383 0.0 2.76851    
cufflinks 0.464       Low
cufflinks 1.426        
cufflinks 0.846        
cufflinks 1.152        
cufflinks 1.491        
cufflinks 2.817       High
cufflinks 1.016        
cufflinks 0.797        
cufflinks 0.882        
cufflinks 0.663       Low
cufflinks 0.912        
cufflinks 1.693       High
cufflinks 0.976        
cufflinks 0.871        
cufflinks 1.214        
cufflinks 0.762        
cufflinks 1.247        

0 Strain