Gene : Glyma.04G248900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 Genomic Order:  2489
Name:  ? Glyma.04G248900 Secondary Identifier:  ? PAC:30489756
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G248900 0.5kb upstream 0.5kb upstream 7331 true Chr04: 51578736-51586066 Glycine max
Glyma.04G248900 0.5kb upstream 0.5kb upstream 500 false Chr04: 51578736-51579235 Glycine max
Glyma.04G248900 0.5kb downstream 0.5kb downstream 7331 true Chr04: 51579236-51586566 Glycine max
Glyma.04G248900 0.5kb downstream 0.5kb downstream 500 false Chr04: 51586067-51586566 Glycine max
Glyma.04G248900 1.0kb upstream 1.0kb upstream 7831 true Chr04: 51578236-51586066 Glycine max
Glyma.04G248900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51578236-51579235 Glycine max
Glyma.04G248900 1.0kb downstream 1.0kb downstream 7831 true Chr04: 51579236-51587066 Glycine max
Glyma.04G248900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51586067-51587066 Glycine max
Glyma.04G248900 2.0kb upstream 2.0kb upstream 8831 true Chr04: 51577236-51586066 Glycine max
Glyma.04G248900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51577236-51579235 Glycine max
Glyma.04G248900 2.0kb downstream 2.0kb downstream 8831 true Chr04: 51579236-51588066 Glycine max
Glyma.04G248900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51586067-51588066 Glycine max
Glyma.04G248900 5.0kb upstream 5.0kb upstream 11831 true Chr04: 51574236-51586066 Glycine max
Glyma.04G248900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51574236-51579235 Glycine max
Glyma.04G248900 5.0kb downstream 5.0kb downstream 11831 true Chr04: 51579236-51591066 Glycine max
Glyma.04G248900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51586067-51591066 Glycine max
Glyma.04G248900 10.0kb upstream 10.0kb upstream 16831 true Chr04: 51569236-51586066 Glycine max
Glyma.04G248900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51569236-51579235 Glycine max
Glyma.04G248900 10.0kb downstream 10.0kb downstream 16831 true Chr04: 51579236-51596066 Glycine max
Glyma.04G248900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51586067-51596066 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303095 5265 Fabidae View MSA
124063888 5270 Rosid View MSA
123738354 5271 Pentapetalae View MSA
122793599 5272 Eudicot View MSA
122045152 5273 Angiosperm View MSA
121344274 5274 Embryophyte View MSA
123424030 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.50934 0.0 15.13    
cufflinks 3.40777 0.0 19.936    
cufflinks 1.24987 0.0 5.44753   Low
cufflinks 2.43499 0.0 15.3415    
cufflinks 3.18621 0.0 17.7832    
cufflinks 1.64205 0.0 6.50928   Low
cufflinks 6.48146 0.0 26.822   High
cufflinks 2.28844 0.0 13.4042    
cufflinks 3.4971 0.0 11.1273    
cufflinks 0.208        
cufflinks 0.125       Low
cufflinks 0.223        
cufflinks 0.279        
cufflinks 0.405       High
cufflinks 0.295        
cufflinks 0.24        
cufflinks 0.109       Low
cufflinks 0.19        
cufflinks 0.534       High
cufflinks 0.189        
cufflinks 0.282        
cufflinks 0.205        
cufflinks 0.418       High
cufflinks 0.159        
cufflinks 0.22        
cufflinks 0.203        

0 Strain