Gene : Glyma.04G249600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  2496
Name:  ? Glyma.04G249600 Secondary Identifier:  ? PAC:30490437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G249600 0.5kb upstream 0.5kb upstream 4857 true Chr04: 51619327-51624183 Glycine max
Glyma.04G249600 0.5kb upstream 0.5kb upstream 500 false Chr04: 51623684-51624183 Glycine max
Glyma.04G249600 0.5kb downstream 0.5kb downstream 4857 true Chr04: 51618827-51623683 Glycine max
Glyma.04G249600 0.5kb downstream 0.5kb downstream 500 false Chr04: 51618827-51619326 Glycine max
Glyma.04G249600 1.0kb upstream 1.0kb upstream 5357 true Chr04: 51619327-51624683 Glycine max
Glyma.04G249600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51623684-51624683 Glycine max
Glyma.04G249600 1.0kb downstream 1.0kb downstream 5357 true Chr04: 51618327-51623683 Glycine max
Glyma.04G249600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51618327-51619326 Glycine max
Glyma.04G249600 2.0kb upstream 2.0kb upstream 6357 true Chr04: 51619327-51625683 Glycine max
Glyma.04G249600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51623684-51625683 Glycine max
Glyma.04G249600 2.0kb downstream 2.0kb downstream 6357 true Chr04: 51617327-51623683 Glycine max
Glyma.04G249600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51617327-51619326 Glycine max
Glyma.04G249600 5.0kb upstream 5.0kb upstream 9357 true Chr04: 51619327-51628683 Glycine max
Glyma.04G249600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51623684-51628683 Glycine max
Glyma.04G249600 5.0kb downstream 5.0kb downstream 9357 true Chr04: 51614327-51623683 Glycine max
Glyma.04G249600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51614327-51619326 Glycine max
Glyma.04G249600 10.0kb upstream 10.0kb upstream 14357 true Chr04: 51619327-51633683 Glycine max
Glyma.04G249600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51623684-51633683 Glycine max
Glyma.04G249600 10.0kb downstream 10.0kb downstream 14357 true Chr04: 51609327-51623683 Glycine max
Glyma.04G249600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51609327-51619326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254094 5265 Fabidae View MSA
123996413 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0378339 0.0 0.153137 Low Low
cufflinks 2.39823 0.0 10.6339    
cufflinks 0.910895 0.0 4.60689    
cufflinks 0.475485 0.0 2.79    
cufflinks 0.839662 0.0 4.42446    
cufflinks 1.27212 0.0 5.92405    
cufflinks 1.67743 0.0 8.8598    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.644957 0.0 3.68366    
cufflinks 0.01     Low Low
cufflinks 0.04     Low  
cufflinks 0.32        
cufflinks 0.499        
cufflinks 0.525        
cufflinks 0.001     Low Low
cufflinks 0.92        
cufflinks 0.027     Low  
cufflinks 0.162        
cufflinks 0.696        
cufflinks 0.834        
cufflinks 0.021     Low  
cufflinks 1.001        
cufflinks 1.651       High
cufflinks 0.036     Low  
cufflinks 0.843        
cufflinks 0.123        

0 Strain