Gene : Glyma.04G252400 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3483 - Uncharacterized conserved protein Genomic Order:  2524
Name:  ? Glyma.04G252400 Secondary Identifier:  ? PAC:30490408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G252400 0.5kb upstream 0.5kb upstream 3617 true Chr04: 51915286-51918902 Glycine max
Glyma.04G252400 0.5kb upstream 0.5kb upstream 500 false Chr04: 51915286-51915785 Glycine max
Glyma.04G252400 0.5kb downstream 0.5kb downstream 3617 true Chr04: 51915786-51919402 Glycine max
Glyma.04G252400 0.5kb downstream 0.5kb downstream 500 false Chr04: 51918903-51919402 Glycine max
Glyma.04G252400 1.0kb upstream 1.0kb upstream 4117 true Chr04: 51914786-51918902 Glycine max
Glyma.04G252400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51914786-51915785 Glycine max
Glyma.04G252400 1.0kb downstream 1.0kb downstream 4117 true Chr04: 51915786-51919902 Glycine max
Glyma.04G252400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51918903-51919902 Glycine max
Glyma.04G252400 2.0kb upstream 2.0kb upstream 5117 true Chr04: 51913786-51918902 Glycine max
Glyma.04G252400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51913786-51915785 Glycine max
Glyma.04G252400 2.0kb downstream 2.0kb downstream 5117 true Chr04: 51915786-51920902 Glycine max
Glyma.04G252400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51918903-51920902 Glycine max
Glyma.04G252400 5.0kb upstream 5.0kb upstream 8117 true Chr04: 51910786-51918902 Glycine max
Glyma.04G252400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51910786-51915785 Glycine max
Glyma.04G252400 5.0kb downstream 5.0kb downstream 8117 true Chr04: 51915786-51923902 Glycine max
Glyma.04G252400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51918903-51923902 Glycine max
Glyma.04G252400 10.0kb upstream 10.0kb upstream 13117 true Chr04: 51905786-51918902 Glycine max
Glyma.04G252400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51905786-51915785 Glycine max
Glyma.04G252400 10.0kb downstream 10.0kb downstream 13117 true Chr04: 51915786-51928902 Glycine max
Glyma.04G252400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51918903-51928902 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309670 5265 Fabidae View MSA
124063457 5270 Rosid View MSA
123747070 5271 Pentapetalae View MSA
122791547 5272 Eudicot View MSA
122045527 5273 Angiosperm View MSA
121349624 5274 Embryophyte View MSA
123424259 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.0332 0.0 98.8104 High  
cufflinks 17.6231 0.0 48.4516   Low
cufflinks 45.2033 0.0 120.782 High High
cufflinks 20.012 0.0 54.5652 High Low
cufflinks 40.7938 0.0 108.858 High  
cufflinks 35.041 0.0 93.515 High  
cufflinks 30.2093 0.0 80.8364 High  
cufflinks 29.3622 0.0 78.6316 High  
cufflinks 40.032 0.0 106.817 High  
cufflinks 5.277        
cufflinks 7.601     High  
cufflinks 7.679     High  
cufflinks 8.189     High  
cufflinks 9.212     High High
cufflinks 10.459     High High
cufflinks 4.305        
cufflinks 4.44        
cufflinks 7.87     High  
cufflinks 3.836       Low
cufflinks 4.421        
cufflinks 6.4     High  
cufflinks 4.649        
cufflinks 3.807       Low
cufflinks 6.788     High  
cufflinks 4.271       Low
cufflinks 7.152     High  

0 Strain