Gene : Glyma.19G222500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12725//PTHR12725:SF49 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  2225
Name:  ? Glyma.19G222500 Secondary Identifier:  ? PAC:30511568
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7204 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G222500 0.5kb upstream 0.5kb upstream 6207 true Chr19: 47475144-47481350 Glycine max
Glyma.19G222500 0.5kb upstream 0.5kb upstream 500 false Chr19: 47475144-47475643 Glycine max
Glyma.19G222500 0.5kb downstream 0.5kb downstream 6207 true Chr19: 47475644-47481850 Glycine max
Glyma.19G222500 0.5kb downstream 0.5kb downstream 500 false Chr19: 47481351-47481850 Glycine max
Glyma.19G222500 1.0kb upstream 1.0kb upstream 6707 true Chr19: 47474644-47481350 Glycine max
Glyma.19G222500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47474644-47475643 Glycine max
Glyma.19G222500 1.0kb downstream 1.0kb downstream 6707 true Chr19: 47475644-47482350 Glycine max
Glyma.19G222500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47481351-47482350 Glycine max
Glyma.19G222500 2.0kb upstream 2.0kb upstream 7707 true Chr19: 47473644-47481350 Glycine max
Glyma.19G222500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47473644-47475643 Glycine max
Glyma.19G222500 2.0kb downstream 2.0kb downstream 7707 true Chr19: 47475644-47483350 Glycine max
Glyma.19G222500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47481351-47483350 Glycine max
Glyma.19G222500 5.0kb upstream 5.0kb upstream 10707 true Chr19: 47470644-47481350 Glycine max
Glyma.19G222500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47470644-47475643 Glycine max
Glyma.19G222500 5.0kb downstream 5.0kb downstream 10707 true Chr19: 47475644-47486350 Glycine max
Glyma.19G222500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47481351-47486350 Glycine max
Glyma.19G222500 10.0kb upstream 10.0kb upstream 15707 true Chr19: 47465644-47481350 Glycine max
Glyma.19G222500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47465644-47475643 Glycine max
Glyma.19G222500 10.0kb downstream 10.0kb downstream 15707 true Chr19: 47475644-47491350 Glycine max
Glyma.19G222500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47481351-47491350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312656 5265 Fabidae View MSA
124070026 5270 Rosid View MSA
123741969 5271 Pentapetalae View MSA
122794377 5272 Eudicot View MSA
122048611 5273 Angiosperm View MSA
121348248 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74055 0.0 43.9681   High
cufflinks 0.477797 0.0 8.63793    
cufflinks 0.0282342 0.0 0.876235 Low Low
cufflinks 0.139864 0.0 2.69264 Low  
cufflinks 0.211542 0.0 3.5937 Low  
cufflinks 1.62649 0.0 14.3307   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.25651 0.0 4.13724    
cufflinks 0.261717 0.0 3.34114    
cufflinks 0.014     Low Low
cufflinks 0.081        
cufflinks 0.03     Low  
cufflinks 0.042     Low  
cufflinks 0.004     Low Low
cufflinks 0.004     Low Low
cufflinks 0.184       High
cufflinks 0.096        
cufflinks 0.056     Low  
cufflinks 0.03     Low  
cufflinks 0.098        
cufflinks 0.111        
cufflinks 0.127        
cufflinks 0.061     Low  
cufflinks 0.101        
cufflinks 0.247       High
cufflinks 0.144        

0 Strain