Gene : Glyma.19G223300 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  2233
Name:  ? Glyma.19G223300 Secondary Identifier:  ? PAC:30514609
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G223300 0.5kb upstream 0.5kb upstream 6294 true Chr19: 47559538-47565831 Glycine max
Glyma.19G223300 0.5kb upstream 0.5kb upstream 500 false Chr19: 47565332-47565831 Glycine max
Glyma.19G223300 0.5kb downstream 0.5kb downstream 6294 true Chr19: 47559038-47565331 Glycine max
Glyma.19G223300 0.5kb downstream 0.5kb downstream 500 false Chr19: 47559038-47559537 Glycine max
Glyma.19G223300 1.0kb upstream 1.0kb upstream 6794 true Chr19: 47559538-47566331 Glycine max
Glyma.19G223300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47565332-47566331 Glycine max
Glyma.19G223300 1.0kb downstream 1.0kb downstream 6794 true Chr19: 47558538-47565331 Glycine max
Glyma.19G223300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47558538-47559537 Glycine max
Glyma.19G223300 2.0kb upstream 2.0kb upstream 7794 true Chr19: 47559538-47567331 Glycine max
Glyma.19G223300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47565332-47567331 Glycine max
Glyma.19G223300 2.0kb downstream 2.0kb downstream 7794 true Chr19: 47557538-47565331 Glycine max
Glyma.19G223300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47557538-47559537 Glycine max
Glyma.19G223300 5.0kb upstream 5.0kb upstream 10794 true Chr19: 47559538-47570331 Glycine max
Glyma.19G223300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47565332-47570331 Glycine max
Glyma.19G223300 5.0kb downstream 5.0kb downstream 10794 true Chr19: 47554538-47565331 Glycine max
Glyma.19G223300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47554538-47559537 Glycine max
Glyma.19G223300 10.0kb upstream 10.0kb upstream 15794 true Chr19: 47559538-47575331 Glycine max
Glyma.19G223300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47565332-47575331 Glycine max
Glyma.19G223300 10.0kb downstream 10.0kb downstream 15794 true Chr19: 47549538-47565331 Glycine max
Glyma.19G223300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47549538-47559537 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308797 5265 Fabidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 178.513 0.0 599.894 High  
cufflinks 65.3221 0.0 185.622 High  
cufflinks 396.609 0.0 1691.26 High High
cufflinks 104.015 0.0 315.962 High  
cufflinks 74.7244 0.0 215.596 High  
cufflinks 165.182 0.0 547.198 High  
cufflinks 55.8826 0.0 155.754 High Low
cufflinks 81.6232 0.0 239.071 High  
cufflinks 91.2469 0.0 271.447 High  
cufflinks 12.002     High  
cufflinks 5.685     High Low
cufflinks 61.956     High High
cufflinks 11.047     High  
cufflinks 9.978     High  
cufflinks 5.048       Low
cufflinks 10.81     High  
cufflinks 20.572     High  
cufflinks 37.568     High High
cufflinks 14.353     High  
cufflinks 17.851     High  
cufflinks 8.995     High  
cufflinks 17.749     High  
cufflinks 13.294     High  
cufflinks 10.175     High  
cufflinks 13.271     High  
cufflinks 16.842     High  

0 Strain