Gene : Glyma.19G225400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR17614 - ZINC FINGER-CONTAINING Genomic Order:  2254
Name:  ? Glyma.19G225400 Secondary Identifier:  ? PAC:30512318
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G225400 0.5kb upstream 0.5kb upstream 4816 true Chr19: 47738477-47743292 Glycine max
Glyma.19G225400 0.5kb upstream 0.5kb upstream 500 false Chr19: 47738477-47738976 Glycine max
Glyma.19G225400 0.5kb downstream 0.5kb downstream 4816 true Chr19: 47738977-47743792 Glycine max
Glyma.19G225400 0.5kb downstream 0.5kb downstream 500 false Chr19: 47743293-47743792 Glycine max
Glyma.19G225400 1.0kb upstream 1.0kb upstream 5316 true Chr19: 47737977-47743292 Glycine max
Glyma.19G225400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47737977-47738976 Glycine max
Glyma.19G225400 1.0kb downstream 1.0kb downstream 5316 true Chr19: 47738977-47744292 Glycine max
Glyma.19G225400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47743293-47744292 Glycine max
Glyma.19G225400 2.0kb upstream 2.0kb upstream 6316 true Chr19: 47736977-47743292 Glycine max
Glyma.19G225400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47736977-47738976 Glycine max
Glyma.19G225400 2.0kb downstream 2.0kb downstream 6316 true Chr19: 47738977-47745292 Glycine max
Glyma.19G225400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47743293-47745292 Glycine max
Glyma.19G225400 5.0kb upstream 5.0kb upstream 9316 true Chr19: 47733977-47743292 Glycine max
Glyma.19G225400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47733977-47738976 Glycine max
Glyma.19G225400 5.0kb downstream 5.0kb downstream 9316 true Chr19: 47738977-47748292 Glycine max
Glyma.19G225400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47743293-47748292 Glycine max
Glyma.19G225400 10.0kb upstream 10.0kb upstream 14316 true Chr19: 47728977-47743292 Glycine max
Glyma.19G225400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47728977-47738976 Glycine max
Glyma.19G225400 10.0kb downstream 10.0kb downstream 14316 true Chr19: 47738977-47753292 Glycine max
Glyma.19G225400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47743293-47753292 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313742 5265 Fabidae View MSA
124065695 5270 Rosid View MSA
123738038 5271 Pentapetalae View MSA
122785785 5272 Eudicot View MSA
122048109 5273 Angiosperm View MSA
121344086 5274 Embryophyte View MSA
123424023 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.213 0.0 40.7188   High
cufflinks 6.12032 0.0 24.0029    
cufflinks 12.4844 0.0 43.2729   High
cufflinks 6.28176 0.0 20.8213    
cufflinks 4.89406 0.0 17.3311    
cufflinks 3.98755 0.0 14.9868   Low
cufflinks 8.82675 0.0 27.75    
cufflinks 6.72125 0.0 22.0531    
cufflinks 4.50716 0.0 16.2793   Low
cufflinks 1.171        
cufflinks 2.184        
cufflinks 2.355        
cufflinks 1.275        
cufflinks 1.468        
cufflinks 1.704        
cufflinks 2.616        
cufflinks 0.51       Low
cufflinks 2.012        
cufflinks 1.723        
cufflinks 3.064       High
cufflinks 1.994        
cufflinks 3.03       High
cufflinks 2.069        
cufflinks 1.842        
cufflinks 2.801       High
cufflinks 1.268        

0 Strain