Gene : Glyma.19G225500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES Genomic Order:  2255
Name:  ? Glyma.19G225500 Secondary Identifier:  ? PAC:30511753
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G225500 0.5kb upstream 0.5kb upstream 5384 true Chr19: 47743727-47749110 Glycine max
Glyma.19G225500 0.5kb upstream 0.5kb upstream 500 false Chr19: 47748611-47749110 Glycine max
Glyma.19G225500 0.5kb downstream 0.5kb downstream 5384 true Chr19: 47743227-47748610 Glycine max
Glyma.19G225500 0.5kb downstream 0.5kb downstream 500 false Chr19: 47743227-47743726 Glycine max
Glyma.19G225500 1.0kb upstream 1.0kb upstream 5884 true Chr19: 47743727-47749610 Glycine max
Glyma.19G225500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47748611-47749610 Glycine max
Glyma.19G225500 1.0kb downstream 1.0kb downstream 5884 true Chr19: 47742727-47748610 Glycine max
Glyma.19G225500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47742727-47743726 Glycine max
Glyma.19G225500 2.0kb upstream 2.0kb upstream 6884 true Chr19: 47743727-47750610 Glycine max
Glyma.19G225500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47748611-47750610 Glycine max
Glyma.19G225500 2.0kb downstream 2.0kb downstream 6884 true Chr19: 47741727-47748610 Glycine max
Glyma.19G225500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47741727-47743726 Glycine max
Glyma.19G225500 5.0kb upstream 5.0kb upstream 9884 true Chr19: 47743727-47753610 Glycine max
Glyma.19G225500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47748611-47753610 Glycine max
Glyma.19G225500 5.0kb downstream 5.0kb downstream 9884 true Chr19: 47738727-47748610 Glycine max
Glyma.19G225500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47738727-47743726 Glycine max
Glyma.19G225500 10.0kb upstream 10.0kb upstream 14884 true Chr19: 47743727-47758610 Glycine max
Glyma.19G225500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47748611-47758610 Glycine max
Glyma.19G225500 10.0kb downstream 10.0kb downstream 14884 true Chr19: 47733727-47748610 Glycine max
Glyma.19G225500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47733727-47743726 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313872 5265 Fabidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.743 0.0 562.103 High  
cufflinks 88.0893 0.0 375.712 High  
cufflinks 465.252 0.0 6303.66 High High
cufflinks 179.571 0.0 1114.3 High  
cufflinks 80.0944 0.0 326.743 High  
cufflinks 200.896 0.0 1339.26 High  
cufflinks 82.9067 0.0 342.16 High  
cufflinks 91.1358 0.0 395.67 High  
cufflinks 146.013 0.0 798.339 High  
cufflinks 17.617     High  
cufflinks 42.31     High High
cufflinks 66.258     High High
cufflinks 19.569     High  
cufflinks 9.794     High Low
cufflinks 26.397     High  
cufflinks 14.335     High Low
cufflinks 23.882     High  
cufflinks 33.845     High  
cufflinks 19.339     High  
cufflinks 25.71     High  
cufflinks 28.557     High  
cufflinks 21.688     High  
cufflinks 13.925     High Low
cufflinks 38.121     High High
cufflinks 18.518     High  
cufflinks 27.491     High  

0 Strain