Gene : Glyma.19G226200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13803//PTHR13803:SF11 - SEC24-RELATED PROTEIN Genomic Order:  2262
Name:  ? Glyma.19G226200 Secondary Identifier:  ? PAC:30512234
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G226200 0.5kb upstream 0.5kb upstream 10201 true Chr19: 47794328-47804528 Glycine max
Glyma.19G226200 0.5kb upstream 0.5kb upstream 500 false Chr19: 47794328-47794827 Glycine max
Glyma.19G226200 0.5kb downstream 0.5kb downstream 10201 true Chr19: 47794828-47805028 Glycine max
Glyma.19G226200 0.5kb downstream 0.5kb downstream 500 false Chr19: 47804529-47805028 Glycine max
Glyma.19G226200 1.0kb upstream 1.0kb upstream 10701 true Chr19: 47793828-47804528 Glycine max
Glyma.19G226200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47793828-47794827 Glycine max
Glyma.19G226200 1.0kb downstream 1.0kb downstream 10701 true Chr19: 47794828-47805528 Glycine max
Glyma.19G226200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47804529-47805528 Glycine max
Glyma.19G226200 2.0kb upstream 2.0kb upstream 11701 true Chr19: 47792828-47804528 Glycine max
Glyma.19G226200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47792828-47794827 Glycine max
Glyma.19G226200 2.0kb downstream 2.0kb downstream 11701 true Chr19: 47794828-47806528 Glycine max
Glyma.19G226200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47804529-47806528 Glycine max
Glyma.19G226200 5.0kb upstream 5.0kb upstream 14701 true Chr19: 47789828-47804528 Glycine max
Glyma.19G226200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47789828-47794827 Glycine max
Glyma.19G226200 5.0kb downstream 5.0kb downstream 14701 true Chr19: 47794828-47809528 Glycine max
Glyma.19G226200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47804529-47809528 Glycine max
Glyma.19G226200 10.0kb upstream 10.0kb upstream 19701 true Chr19: 47784828-47804528 Glycine max
Glyma.19G226200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47784828-47794827 Glycine max
Glyma.19G226200 10.0kb downstream 10.0kb downstream 19701 true Chr19: 47794828-47814528 Glycine max
Glyma.19G226200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47804529-47814528 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306588 5265 Fabidae View MSA
124061361 5270 Rosid View MSA
123740162 5271 Pentapetalae View MSA
122790421 5272 Eudicot View MSA
122044052 5273 Angiosperm View MSA
121345346 5274 Embryophyte View MSA
123423840 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8589 0.0 64.83    
cufflinks 12.4456 0.0 43.2949   Low
cufflinks 21.6165 0.0 84.5536 High  
cufflinks 20.5055 0.0 77.2499 High  
cufflinks 25.9867 0.0 105.238 High High
cufflinks 21.355 0.0 81.4365    
cufflinks 17.0469 0.0 54.0401    
cufflinks 20.2979 0.0 76.3957    
cufflinks 18.8433 0.0 70.6065    
cufflinks 4.995        
cufflinks 4.087        
cufflinks 3.921        
cufflinks 6.916       High
cufflinks 7.147     High High
cufflinks 2.77       Low
cufflinks 3.376        
cufflinks 4.086        
cufflinks 4.09        
cufflinks 4.106        
cufflinks 3.416        
cufflinks 4.246        
cufflinks 3.386        
cufflinks 2.919       Low
cufflinks 5.069        
cufflinks 3.35        
cufflinks 4.997        

0 Strain