Gene : Glyma.19G226600 G. max Wm82.a2.v1
Defline:  (1 of 5) 3.4.19.3 - Pyroglutamyl-peptidase I / Pyrrolidone-carboxylate peptidase Genomic Order:  2266
Name:  ? Glyma.19G226600 Secondary Identifier:  ? PAC:30511290
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G226600 0.5kb upstream 0.5kb upstream 3984 true Chr19: 47829848-47833831 Glycine max
Glyma.19G226600 0.5kb upstream 0.5kb upstream 500 false Chr19: 47833332-47833831 Glycine max
Glyma.19G226600 0.5kb downstream 0.5kb downstream 3984 true Chr19: 47829348-47833331 Glycine max
Glyma.19G226600 0.5kb downstream 0.5kb downstream 500 false Chr19: 47829348-47829847 Glycine max
Glyma.19G226600 1.0kb upstream 1.0kb upstream 4484 true Chr19: 47829848-47834331 Glycine max
Glyma.19G226600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47833332-47834331 Glycine max
Glyma.19G226600 1.0kb downstream 1.0kb downstream 4484 true Chr19: 47828848-47833331 Glycine max
Glyma.19G226600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47828848-47829847 Glycine max
Glyma.19G226600 2.0kb upstream 2.0kb upstream 5484 true Chr19: 47829848-47835331 Glycine max
Glyma.19G226600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47833332-47835331 Glycine max
Glyma.19G226600 2.0kb downstream 2.0kb downstream 5484 true Chr19: 47827848-47833331 Glycine max
Glyma.19G226600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47827848-47829847 Glycine max
Glyma.19G226600 5.0kb upstream 5.0kb upstream 8484 true Chr19: 47829848-47838331 Glycine max
Glyma.19G226600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47833332-47838331 Glycine max
Glyma.19G226600 5.0kb downstream 5.0kb downstream 8484 true Chr19: 47824848-47833331 Glycine max
Glyma.19G226600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47824848-47829847 Glycine max
Glyma.19G226600 10.0kb upstream 10.0kb upstream 13484 true Chr19: 47829848-47843331 Glycine max
Glyma.19G226600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47833332-47843331 Glycine max
Glyma.19G226600 10.0kb downstream 10.0kb downstream 13484 true Chr19: 47819848-47833331 Glycine max
Glyma.19G226600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47819848-47829847 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026217 5273 Angiosperm View MSA
122311801 5265 Fabidae View MSA
124062104 5270 Rosid View MSA
123741081 5271 Pentapetalae View MSA
122790399 5272 Eudicot View MSA
121348835 5274 Embryophyte View MSA
123428644 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2465 0.0 64.1226    
cufflinks 10.8702 0.0 45.9841   Low
cufflinks 48.5265 0.0 191.635 High High
cufflinks 21.8927 0.0 76.0069 High  
cufflinks 12.0215 0.0 49.9611   Low
cufflinks 31.9185 0.0 121.176 High  
cufflinks 14.3548 0.0 51.6542    
cufflinks 42.9487 0.0 148.906 High High
cufflinks 19.5484 0.0 75.6504    
cufflinks 2.928       High
cufflinks 1.914        
cufflinks 4.423       High
cufflinks 1.618        
cufflinks 0.548       Low
cufflinks 1.246        
cufflinks 1.211        
cufflinks 1.64        
cufflinks 2.1        
cufflinks 1.559        
cufflinks 1.64        
cufflinks 1.959        
cufflinks 1.496        
cufflinks 1.165        
cufflinks 2.368        
cufflinks 1.572        
cufflinks 1.858        

0 Strain