Gene : Glyma.19G217900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24012:SF382 - FLOWERING TIME CONTROL PROTEIN FCA-RELATED Genomic Order:  2179
Name:  ? Glyma.19G217900 Secondary Identifier:  ? PAC:30515187
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G217900 0.5kb upstream 0.5kb upstream 9409 true Chr19: 47059800-47069208 Glycine max
Glyma.19G217900 0.5kb upstream 0.5kb upstream 500 false Chr19: 47068709-47069208 Glycine max
Glyma.19G217900 0.5kb downstream 0.5kb downstream 9409 true Chr19: 47059300-47068708 Glycine max
Glyma.19G217900 0.5kb downstream 0.5kb downstream 500 false Chr19: 47059300-47059799 Glycine max
Glyma.19G217900 1.0kb upstream 1.0kb upstream 9909 true Chr19: 47059800-47069708 Glycine max
Glyma.19G217900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47068709-47069708 Glycine max
Glyma.19G217900 1.0kb downstream 1.0kb downstream 9909 true Chr19: 47058800-47068708 Glycine max
Glyma.19G217900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47058800-47059799 Glycine max
Glyma.19G217900 2.0kb upstream 2.0kb upstream 10909 true Chr19: 47059800-47070708 Glycine max
Glyma.19G217900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47068709-47070708 Glycine max
Glyma.19G217900 2.0kb downstream 2.0kb downstream 10909 true Chr19: 47057800-47068708 Glycine max
Glyma.19G217900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47057800-47059799 Glycine max
Glyma.19G217900 5.0kb upstream 5.0kb upstream 13909 true Chr19: 47059800-47073708 Glycine max
Glyma.19G217900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47068709-47073708 Glycine max
Glyma.19G217900 5.0kb downstream 5.0kb downstream 13909 true Chr19: 47054800-47068708 Glycine max
Glyma.19G217900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47054800-47059799 Glycine max
Glyma.19G217900 10.0kb upstream 10.0kb upstream 18909 true Chr19: 47059800-47078708 Glycine max
Glyma.19G217900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47068709-47078708 Glycine max
Glyma.19G217900 10.0kb downstream 10.0kb downstream 18909 true Chr19: 47049800-47068708 Glycine max
Glyma.19G217900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47049800-47059799 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312423 5265 Fabidae View MSA
124070847 5270 Rosid View MSA
123745901 5271 Pentapetalae View MSA
122794075 5272 Eudicot View MSA
122048371 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349798 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.26954 0.0 15.3029   High
cufflinks 4.0101 0.0 14.6953    
cufflinks 4.51806 0.0 18.4872   High
cufflinks 2.39334 0.0 12.2947   Low
cufflinks 3.54883 0.0 16.1212    
cufflinks 2.80725 0.0 11.4453    
cufflinks 3.30064 0.0 13.1514    
cufflinks 2.94719 0.0 11.8347    
cufflinks 2.85541 0.0 13.8155    
cufflinks 0.179       Low
cufflinks 0.186       Low
cufflinks 0.281        
cufflinks 0.265        
cufflinks 0.284        
cufflinks 0.254        
cufflinks 0.415        
cufflinks 0.252        
cufflinks 0.27        
cufflinks 0.473       High
cufflinks 0.479       High
cufflinks 0.246        
cufflinks 0.482       High
cufflinks 0.407        
cufflinks 0.237        
cufflinks 0.446       High
cufflinks 0.24        

0 Strain