Gene : Glyma.19G221200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Genomic Order:  2212
Name:  ? Glyma.19G221200 Secondary Identifier:  ? PAC:30514898
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G221200 0.5kb upstream 0.5kb upstream 3373 true Chr19: 47307777-47311149 Glycine max
Glyma.19G221200 0.5kb upstream 0.5kb upstream 500 false Chr19: 47310650-47311149 Glycine max
Glyma.19G221200 0.5kb downstream 0.5kb downstream 3373 true Chr19: 47307277-47310649 Glycine max
Glyma.19G221200 0.5kb downstream 0.5kb downstream 500 false Chr19: 47307277-47307776 Glycine max
Glyma.19G221200 1.0kb upstream 1.0kb upstream 3873 true Chr19: 47307777-47311649 Glycine max
Glyma.19G221200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47310650-47311649 Glycine max
Glyma.19G221200 1.0kb downstream 1.0kb downstream 3873 true Chr19: 47306777-47310649 Glycine max
Glyma.19G221200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47306777-47307776 Glycine max
Glyma.19G221200 2.0kb upstream 2.0kb upstream 4873 true Chr19: 47307777-47312649 Glycine max
Glyma.19G221200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47310650-47312649 Glycine max
Glyma.19G221200 2.0kb downstream 2.0kb downstream 4873 true Chr19: 47305777-47310649 Glycine max
Glyma.19G221200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47305777-47307776 Glycine max
Glyma.19G221200 5.0kb upstream 5.0kb upstream 7873 true Chr19: 47307777-47315649 Glycine max
Glyma.19G221200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47310650-47315649 Glycine max
Glyma.19G221200 5.0kb downstream 5.0kb downstream 7873 true Chr19: 47302777-47310649 Glycine max
Glyma.19G221200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47302777-47307776 Glycine max
Glyma.19G221200 10.0kb upstream 10.0kb upstream 12873 true Chr19: 47307777-47320649 Glycine max
Glyma.19G221200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47310650-47320649 Glycine max
Glyma.19G221200 10.0kb downstream 10.0kb downstream 12873 true Chr19: 47297777-47310649 Glycine max
Glyma.19G221200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47297777-47307776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300170 5265 Fabidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79291 0.0 9.35903   Low
cufflinks 4.7638 0.0 14.8141    
cufflinks 5.88538 0.0 17.7513    
cufflinks 6.45187 0.0 19.1698    
cufflinks 4.77347 0.0 14.8377    
cufflinks 5.89167 0.0 17.8125    
cufflinks 7.01123 0.0 20.7165    
cufflinks 6.13449 0.0 18.3448    
cufflinks 5.97548 0.0 17.9909    
cufflinks 1.285        
cufflinks 1.247        
cufflinks 1.795        
cufflinks 1.556        
cufflinks 1.648        
cufflinks 2.036        
cufflinks 1.878        
cufflinks 0.786       Low
cufflinks 2.041        
cufflinks 1.79        
cufflinks 2.074       High
cufflinks 1.222       Low
cufflinks 1.784        
cufflinks 1.777        
cufflinks 1.414        
cufflinks 2.06       High
cufflinks 1.346        

0 Strain