Gene : Glyma.19G215300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12709:SF1 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8 Genomic Order:  2153
Name:  ? Glyma.19G215300 Secondary Identifier:  ? PAC:30514340
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G215300 0.5kb upstream 0.5kb upstream 4946 true Chr19: 46824653-46829598 Glycine max
Glyma.19G215300 0.5kb upstream 0.5kb upstream 500 false Chr19: 46824653-46825152 Glycine max
Glyma.19G215300 0.5kb downstream 0.5kb downstream 4946 true Chr19: 46825153-46830098 Glycine max
Glyma.19G215300 0.5kb downstream 0.5kb downstream 500 false Chr19: 46829599-46830098 Glycine max
Glyma.19G215300 1.0kb upstream 1.0kb upstream 5446 true Chr19: 46824153-46829598 Glycine max
Glyma.19G215300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46824153-46825152 Glycine max
Glyma.19G215300 1.0kb downstream 1.0kb downstream 5446 true Chr19: 46825153-46830598 Glycine max
Glyma.19G215300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46829599-46830598 Glycine max
Glyma.19G215300 2.0kb upstream 2.0kb upstream 6446 true Chr19: 46823153-46829598 Glycine max
Glyma.19G215300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46823153-46825152 Glycine max
Glyma.19G215300 2.0kb downstream 2.0kb downstream 6446 true Chr19: 46825153-46831598 Glycine max
Glyma.19G215300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46829599-46831598 Glycine max
Glyma.19G215300 5.0kb upstream 5.0kb upstream 9446 true Chr19: 46820153-46829598 Glycine max
Glyma.19G215300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46820153-46825152 Glycine max
Glyma.19G215300 5.0kb downstream 5.0kb downstream 9446 true Chr19: 46825153-46834598 Glycine max
Glyma.19G215300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46829599-46834598 Glycine max
Glyma.19G215300 10.0kb upstream 10.0kb upstream 14446 true Chr19: 46815153-46829598 Glycine max
Glyma.19G215300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46815153-46825152 Glycine max
Glyma.19G215300 10.0kb downstream 10.0kb downstream 14446 true Chr19: 46825153-46839598 Glycine max
Glyma.19G215300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46829599-46839598 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026323 5273 Angiosperm View MSA
122300977 5265 Fabidae View MSA
124064217 5270 Rosid View MSA
123737129 5271 Pentapetalae View MSA
122791861 5272 Eudicot View MSA
121347367 5274 Embryophyte View MSA
123423953 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.50056 0.0 41.2409    
cufflinks 8.67477 0.0 45.9991    
cufflinks 10.7287 0.0 57.7214   High
cufflinks 8.44746 0.0 50.0193    
cufflinks 10.7009 0.0 61.1618   High
cufflinks 6.92843 0.0 42.0684   Low
cufflinks 8.83544 0.0 36.5056    
cufflinks 7.84248 0.0 43.4555    
cufflinks 10.0673 0.0 52.3855    
cufflinks 0.383       Low
cufflinks 0.42        
cufflinks 0.769       High
cufflinks 0.599        
cufflinks 0.818       High
cufflinks 0.53        
cufflinks 0.546        
cufflinks 0.326       Low
cufflinks 0.866       High
cufflinks 0.565        
cufflinks 0.625        
cufflinks 0.381       Low
cufflinks 0.582        
cufflinks 0.511        
cufflinks 0.426        
cufflinks 0.565        
cufflinks 0.418        

0 Strain