Gene : Glyma.19G216000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  2160
Name:  ? Glyma.19G216000 Secondary Identifier:  ? PAC:30514285
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G216000 0.5kb upstream 0.5kb upstream 10677 true Chr19: 46899926-46910602 Glycine max
Glyma.19G216000 0.5kb upstream 0.5kb upstream 500 false Chr19: 46910103-46910602 Glycine max
Glyma.19G216000 0.5kb downstream 0.5kb downstream 10677 true Chr19: 46899426-46910102 Glycine max
Glyma.19G216000 0.5kb downstream 0.5kb downstream 500 false Chr19: 46899426-46899925 Glycine max
Glyma.19G216000 1.0kb upstream 1.0kb upstream 11177 true Chr19: 46899926-46911102 Glycine max
Glyma.19G216000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46910103-46911102 Glycine max
Glyma.19G216000 1.0kb downstream 1.0kb downstream 11177 true Chr19: 46898926-46910102 Glycine max
Glyma.19G216000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46898926-46899925 Glycine max
Glyma.19G216000 2.0kb upstream 2.0kb upstream 12177 true Chr19: 46899926-46912102 Glycine max
Glyma.19G216000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46910103-46912102 Glycine max
Glyma.19G216000 2.0kb downstream 2.0kb downstream 12177 true Chr19: 46897926-46910102 Glycine max
Glyma.19G216000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46897926-46899925 Glycine max
Glyma.19G216000 5.0kb upstream 5.0kb upstream 15177 true Chr19: 46899926-46915102 Glycine max
Glyma.19G216000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46910103-46915102 Glycine max
Glyma.19G216000 5.0kb downstream 5.0kb downstream 15177 true Chr19: 46894926-46910102 Glycine max
Glyma.19G216000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46894926-46899925 Glycine max
Glyma.19G216000 10.0kb upstream 10.0kb upstream 20177 true Chr19: 46899926-46920102 Glycine max
Glyma.19G216000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46910103-46920102 Glycine max
Glyma.19G216000 10.0kb downstream 10.0kb downstream 20177 true Chr19: 46889926-46910102 Glycine max
Glyma.19G216000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46889926-46899925 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300035 5265 Fabidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.12774 0.0 9.20946    
cufflinks 5.21567 0.0 15.6339   High
cufflinks 2.80446 0.0 17.8533    
cufflinks 2.74583 0.0 11.1789    
cufflinks 2.43671 0.0 10.0224    
cufflinks 1.14764 0.0 4.10724   Low
cufflinks 2.75649 0.0 8.75706    
cufflinks 2.34529 0.0 7.539    
cufflinks 2.87561 0.0 9.07875    
cufflinks 0.536        
cufflinks 0.148       Low
cufflinks 0.857        
cufflinks 0.779        
cufflinks 0.972        
cufflinks 0.273        
cufflinks 0.592        
cufflinks 0.23        
cufflinks 0.586        
cufflinks 2.04       High
cufflinks 0.464        
cufflinks 0.132       Low
cufflinks 0.561        
cufflinks 0.925        
cufflinks 0.124       Low
cufflinks 0.48        
cufflinks 0.221        

0 Strain