Gene : Glyma.19G207200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13169//PTHR13169:SF5 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Genomic Order:  2072
Name:  ? Glyma.19G207200 Secondary Identifier:  ? PAC:30513715
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G207200 0.5kb upstream 0.5kb upstream 4558 true Chr19: 46252320-46256877 Glycine max
Glyma.19G207200 0.5kb upstream 0.5kb upstream 500 false Chr19: 46256378-46256877 Glycine max
Glyma.19G207200 0.5kb downstream 0.5kb downstream 4558 true Chr19: 46251820-46256377 Glycine max
Glyma.19G207200 0.5kb downstream 0.5kb downstream 500 false Chr19: 46251820-46252319 Glycine max
Glyma.19G207200 1.0kb upstream 1.0kb upstream 5058 true Chr19: 46252320-46257377 Glycine max
Glyma.19G207200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46256378-46257377 Glycine max
Glyma.19G207200 1.0kb downstream 1.0kb downstream 5058 true Chr19: 46251320-46256377 Glycine max
Glyma.19G207200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46251320-46252319 Glycine max
Glyma.19G207200 2.0kb upstream 2.0kb upstream 6058 true Chr19: 46252320-46258377 Glycine max
Glyma.19G207200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46256378-46258377 Glycine max
Glyma.19G207200 2.0kb downstream 2.0kb downstream 6058 true Chr19: 46250320-46256377 Glycine max
Glyma.19G207200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46250320-46252319 Glycine max
Glyma.19G207200 5.0kb upstream 5.0kb upstream 9058 true Chr19: 46252320-46261377 Glycine max
Glyma.19G207200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46256378-46261377 Glycine max
Glyma.19G207200 5.0kb downstream 5.0kb downstream 9058 true Chr19: 46247320-46256377 Glycine max
Glyma.19G207200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46247320-46252319 Glycine max
Glyma.19G207200 10.0kb upstream 10.0kb upstream 14058 true Chr19: 46252320-46266377 Glycine max
Glyma.19G207200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46256378-46266377 Glycine max
Glyma.19G207200 10.0kb downstream 10.0kb downstream 14058 true Chr19: 46242320-46256377 Glycine max
Glyma.19G207200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46242320-46252319 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247667 5265 Fabidae Singleton cluster - no MSA
124069893 5270 Rosid View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.95575 0.0 10.7666    
cufflinks 1.53992 0.0 8.78757    
cufflinks 2.24346 0.0 12.0981    
cufflinks 3.41573 0.0 16.1238   High
cufflinks 0.101292 0.0 0.411995 Low Low
cufflinks 0.472974 0.0 2.35845    
cufflinks 0.598642 0.0 3.99037    
cufflinks 1.93421 0.0 11.0545    
cufflinks 0.674164 0.0 4.493    
cufflinks 0.132        
cufflinks 0.019     Low  
cufflinks 0.397       High
cufflinks 0.016     Low Low
cufflinks 0.013     Low Low
cufflinks 0.117        
cufflinks 0.226        
cufflinks 0.009     Low Low
cufflinks 0.839       High
cufflinks 0.113        
cufflinks 0.267        
cufflinks 0.017     Low Low
cufflinks 0.32        
cufflinks 0.171        
cufflinks 0.021     Low  
cufflinks 0.248        
cufflinks 0.023     Low  

0 Strain