Gene : Glyma.19G207500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B Genomic Order:  2075
Name:  ? Glyma.19G207500 Secondary Identifier:  ? PAC:30515264
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G207500 0.5kb upstream 0.5kb upstream 3970 true Chr19: 46269694-46273663 Glycine max
Glyma.19G207500 0.5kb upstream 0.5kb upstream 500 false Chr19: 46269694-46270193 Glycine max
Glyma.19G207500 0.5kb downstream 0.5kb downstream 3970 true Chr19: 46270194-46274163 Glycine max
Glyma.19G207500 0.5kb downstream 0.5kb downstream 500 false Chr19: 46273664-46274163 Glycine max
Glyma.19G207500 1.0kb upstream 1.0kb upstream 4470 true Chr19: 46269194-46273663 Glycine max
Glyma.19G207500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46269194-46270193 Glycine max
Glyma.19G207500 1.0kb downstream 1.0kb downstream 4470 true Chr19: 46270194-46274663 Glycine max
Glyma.19G207500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46273664-46274663 Glycine max
Glyma.19G207500 2.0kb upstream 2.0kb upstream 5470 true Chr19: 46268194-46273663 Glycine max
Glyma.19G207500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46268194-46270193 Glycine max
Glyma.19G207500 2.0kb downstream 2.0kb downstream 5470 true Chr19: 46270194-46275663 Glycine max
Glyma.19G207500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46273664-46275663 Glycine max
Glyma.19G207500 5.0kb upstream 5.0kb upstream 8470 true Chr19: 46265194-46273663 Glycine max
Glyma.19G207500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46265194-46270193 Glycine max
Glyma.19G207500 5.0kb downstream 5.0kb downstream 8470 true Chr19: 46270194-46278663 Glycine max
Glyma.19G207500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46273664-46278663 Glycine max
Glyma.19G207500 10.0kb upstream 10.0kb upstream 13470 true Chr19: 46260194-46273663 Glycine max
Glyma.19G207500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46260194-46270193 Glycine max
Glyma.19G207500 10.0kb downstream 10.0kb downstream 13470 true Chr19: 46270194-46283663 Glycine max
Glyma.19G207500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46273664-46283663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307529 5265 Fabidae View MSA
124062666 5270 Rosid View MSA
123738342 5271 Pentapetalae View MSA
122787520 5272 Eudicot View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.701 0.0 49.8959   High
cufflinks 16.1738 0.0 43.2183    
cufflinks 11.4546 0.0 30.9141   Low
cufflinks 15.6525 0.0 41.8324    
cufflinks 15.3303 0.0 41.0131    
cufflinks 17.314 0.0 46.2209    
cufflinks 16.4158 0.0 43.8727    
cufflinks 14.8272 0.0 39.6731    
cufflinks 19.0736 0.0 50.8861   High
cufflinks 5.923        
cufflinks 3.35       Low
cufflinks 7.324     High  
cufflinks 9.747     High High
cufflinks 12.529     High High
cufflinks 3.185       Low
cufflinks 7.237     High  
cufflinks 3.934        
cufflinks 8.534     High  
cufflinks 7.678     High  
cufflinks 7.287     High  
cufflinks 3.384       Low
cufflinks 7.054        
cufflinks 7.064        
cufflinks 3.86       Low
cufflinks 7.54     High  
cufflinks 3.676       Low

0 Strain