Gene : Glyma.19G208000 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR11075:SF9 - PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED Genomic Order:  2080
Name:  ? Glyma.19G208000 Secondary Identifier:  ? PAC:30513096

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G208000 0.5kb upstream 0.5kb upstream 7188 true Chr19: 46303648-46310835 Glycine max
Glyma.19G208000 0.5kb upstream 0.5kb upstream 500 false Chr19: 46303648-46304147 Glycine max
Glyma.19G208000 0.5kb downstream 0.5kb downstream 7188 true Chr19: 46304148-46311335 Glycine max
Glyma.19G208000 0.5kb downstream 0.5kb downstream 500 false Chr19: 46310836-46311335 Glycine max
Glyma.19G208000 1.0kb upstream 1.0kb upstream 7688 true Chr19: 46303148-46310835 Glycine max
Glyma.19G208000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46303148-46304147 Glycine max
Glyma.19G208000 1.0kb downstream 1.0kb downstream 7688 true Chr19: 46304148-46311835 Glycine max
Glyma.19G208000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46310836-46311835 Glycine max
Glyma.19G208000 2.0kb upstream 2.0kb upstream 8688 true Chr19: 46302148-46310835 Glycine max
Glyma.19G208000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46302148-46304147 Glycine max
Glyma.19G208000 2.0kb downstream 2.0kb downstream 8688 true Chr19: 46304148-46312835 Glycine max
Glyma.19G208000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46310836-46312835 Glycine max
Glyma.19G208000 5.0kb upstream 5.0kb upstream 11688 true Chr19: 46299148-46310835 Glycine max
Glyma.19G208000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46299148-46304147 Glycine max
Glyma.19G208000 5.0kb downstream 5.0kb downstream 11688 true Chr19: 46304148-46315835 Glycine max
Glyma.19G208000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46310836-46315835 Glycine max
Glyma.19G208000 10.0kb upstream 10.0kb upstream 16688 true Chr19: 46294148-46310835 Glycine max
Glyma.19G208000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46294148-46304147 Glycine max
Glyma.19G208000 10.0kb downstream 10.0kb downstream 16688 true Chr19: 46304148-46320835 Glycine max
Glyma.19G208000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46310836-46320835 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041311 5273 Angiosperm View MSA
122306921 5265 Fabidae View MSA
124062646 5270 Rosid View MSA
123740537 5271 Pentapetalae View MSA
122789829 5272 Eudicot View MSA
121344986 5274 Embryophyte View MSA
123425120 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07181 0.0 9.30759   High
cufflinks 1.29898 0.0 4.42179    
cufflinks 0.993385 0.0 3.46694    
cufflinks 1.05394 0.0 3.66074    
cufflinks 0.409254 0.0 1.51618    
cufflinks 0.206882 0.0 0.790754 Low Low
cufflinks 1.35641 0.0 4.60251    
cufflinks 1.40779 0.0 4.74213    
cufflinks 0.346252 0.0 1.29305   Low
cufflinks 0.241        
cufflinks 0.07       Low
cufflinks 0.454        
cufflinks 0.136        
cufflinks 0.165        
cufflinks 0.048     Low Low
cufflinks 0.826       High
cufflinks 0.126        
cufflinks 0.417        
cufflinks 0.623        
cufflinks 0.713        
cufflinks 0.089        
cufflinks 0.865       High
cufflinks 0.772       High
cufflinks 0.051     Low Low
cufflinks 0.894       High
cufflinks 0.064     Low Low

0 Strain