Gene : Glyma.19G208400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23336:SF14 - CW-TYPE ZINC-FINGER PROTEIN Genomic Order:  2084
Name:  ? Glyma.19G208400 Secondary Identifier:  ? PAC:30515167
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G208400 0.5kb upstream 0.5kb upstream 10264 true Chr19: 46340035-46350298 Glycine max
Glyma.19G208400 0.5kb upstream 0.5kb upstream 500 false Chr19: 46340035-46340534 Glycine max
Glyma.19G208400 0.5kb downstream 0.5kb downstream 10264 true Chr19: 46340535-46350798 Glycine max
Glyma.19G208400 0.5kb downstream 0.5kb downstream 500 false Chr19: 46350299-46350798 Glycine max
Glyma.19G208400 1.0kb upstream 1.0kb upstream 10764 true Chr19: 46339535-46350298 Glycine max
Glyma.19G208400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46339535-46340534 Glycine max
Glyma.19G208400 1.0kb downstream 1.0kb downstream 10764 true Chr19: 46340535-46351298 Glycine max
Glyma.19G208400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46350299-46351298 Glycine max
Glyma.19G208400 2.0kb upstream 2.0kb upstream 11764 true Chr19: 46338535-46350298 Glycine max
Glyma.19G208400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46338535-46340534 Glycine max
Glyma.19G208400 2.0kb downstream 2.0kb downstream 11764 true Chr19: 46340535-46352298 Glycine max
Glyma.19G208400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46350299-46352298 Glycine max
Glyma.19G208400 5.0kb upstream 5.0kb upstream 14764 true Chr19: 46335535-46350298 Glycine max
Glyma.19G208400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46335535-46340534 Glycine max
Glyma.19G208400 5.0kb downstream 5.0kb downstream 14764 true Chr19: 46340535-46355298 Glycine max
Glyma.19G208400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46350299-46355298 Glycine max
Glyma.19G208400 10.0kb upstream 10.0kb upstream 19764 true Chr19: 46330535-46350298 Glycine max
Glyma.19G208400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46330535-46340534 Glycine max
Glyma.19G208400 10.0kb downstream 10.0kb downstream 19764 true Chr19: 46340535-46360298 Glycine max
Glyma.19G208400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46350299-46360298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302780 5265 Fabidae View MSA
124070830 5270 Rosid View MSA
123751363 5271 Pentapetalae View MSA
122792516 5272 Eudicot View MSA
122044427 5273 Angiosperm View MSA
121345237 5274 Embryophyte View MSA
123380178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.77806 0.0 26.9603   High
cufflinks 4.2172 0.0 11.2531    
cufflinks 10.6525 0.0 29.7192   High
cufflinks 5.43557 0.0 14.5359    
cufflinks 4.24452 0.0 11.3263    
cufflinks 4.25081 0.0 11.3424    
cufflinks 5.87871 0.0 15.7369    
cufflinks 5.08497 0.0 13.5794    
cufflinks 6.2565 0.0 16.7874    
cufflinks 9.608     High  
cufflinks 19.202     High High
cufflinks 9.769     High  
cufflinks 5.52       Low
cufflinks 4.977       Low
cufflinks 19.152     High High
cufflinks 8.725     High  
cufflinks 12.271     High  
cufflinks 9.313     High  
cufflinks 7.829     High  
cufflinks 8.986     High  
cufflinks 17.13     High High
cufflinks 9.221     High  
cufflinks 7.753     High  
cufflinks 16.267     High High
cufflinks 8.55     High  
cufflinks 18.442     High High

0 Strain