Gene : Glyma.19G210200 G. max Wm82.a2.v1
Defline:  (1 of 23) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  2102
Name:  ? Glyma.19G210200 Secondary Identifier:  ? PAC:30514248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G210200 0.5kb upstream 0.5kb upstream 1868 true Chr19: 46439447-46441314 Glycine max
Glyma.19G210200 0.5kb upstream 0.5kb upstream 500 false Chr19: 46440815-46441314 Glycine max
Glyma.19G210200 0.5kb downstream 0.5kb downstream 1868 true Chr19: 46438947-46440814 Glycine max
Glyma.19G210200 0.5kb downstream 0.5kb downstream 500 false Chr19: 46438947-46439446 Glycine max
Glyma.19G210200 1.0kb upstream 1.0kb upstream 2368 true Chr19: 46439447-46441814 Glycine max
Glyma.19G210200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46440815-46441814 Glycine max
Glyma.19G210200 1.0kb downstream 1.0kb downstream 2368 true Chr19: 46438447-46440814 Glycine max
Glyma.19G210200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46438447-46439446 Glycine max
Glyma.19G210200 2.0kb upstream 2.0kb upstream 3368 true Chr19: 46439447-46442814 Glycine max
Glyma.19G210200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46440815-46442814 Glycine max
Glyma.19G210200 2.0kb downstream 2.0kb downstream 3368 true Chr19: 46437447-46440814 Glycine max
Glyma.19G210200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46437447-46439446 Glycine max
Glyma.19G210200 5.0kb upstream 5.0kb upstream 6368 true Chr19: 46439447-46445814 Glycine max
Glyma.19G210200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46440815-46445814 Glycine max
Glyma.19G210200 5.0kb downstream 5.0kb downstream 6368 true Chr19: 46434447-46440814 Glycine max
Glyma.19G210200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46434447-46439446 Glycine max
Glyma.19G210200 10.0kb upstream 10.0kb upstream 11368 true Chr19: 46439447-46450814 Glycine max
Glyma.19G210200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46440815-46450814 Glycine max
Glyma.19G210200 10.0kb downstream 10.0kb downstream 11368 true Chr19: 46429447-46440814 Glycine max
Glyma.19G210200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46429447-46439446 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311816 5265 Fabidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03074 0.0 3.69355    
cufflinks 1.07753 0.0 3.8537    
cufflinks 4.29646 0.0 13.117   High
cufflinks 1.41248 0.0 4.94318    
cufflinks 1.8468 0.0 6.26751    
cufflinks 3.64049 0.0 11.322   High
cufflinks 1.02879 0.0 3.67898    
cufflinks 1.40848 0.0 4.92585    
cufflinks 1.31518 0.0 4.62226    
cufflinks 8.019     High High
cufflinks 5.214        
cufflinks 6.617        
cufflinks 3.057        
cufflinks 2.325        
cufflinks 1.732        
cufflinks 0.789       Low
cufflinks 23.768     High High
cufflinks 3.156        
cufflinks 1.756        
cufflinks 0.641       Low
cufflinks 4.474        
cufflinks 0.926       Low
cufflinks 1.415        
cufflinks 5.876        
cufflinks 0.678       Low
cufflinks 9.57     High High

0 Strain