Gene : Glyma.19G210500 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1188 - WD40 repeat protein Genomic Order:  2105
Name:  ? Glyma.19G210500 Secondary Identifier:  ? PAC:30513068
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G210500 0.5kb upstream 0.5kb upstream 4833 true Chr19: 46451691-46456523 Glycine max
Glyma.19G210500 0.5kb upstream 0.5kb upstream 500 false Chr19: 46456024-46456523 Glycine max
Glyma.19G210500 0.5kb downstream 0.5kb downstream 4833 true Chr19: 46451191-46456023 Glycine max
Glyma.19G210500 0.5kb downstream 0.5kb downstream 500 false Chr19: 46451191-46451690 Glycine max
Glyma.19G210500 1.0kb upstream 1.0kb upstream 5333 true Chr19: 46451691-46457023 Glycine max
Glyma.19G210500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46456024-46457023 Glycine max
Glyma.19G210500 1.0kb downstream 1.0kb downstream 5333 true Chr19: 46450691-46456023 Glycine max
Glyma.19G210500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46450691-46451690 Glycine max
Glyma.19G210500 2.0kb upstream 2.0kb upstream 6333 true Chr19: 46451691-46458023 Glycine max
Glyma.19G210500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46456024-46458023 Glycine max
Glyma.19G210500 2.0kb downstream 2.0kb downstream 6333 true Chr19: 46449691-46456023 Glycine max
Glyma.19G210500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46449691-46451690 Glycine max
Glyma.19G210500 5.0kb upstream 5.0kb upstream 9333 true Chr19: 46451691-46461023 Glycine max
Glyma.19G210500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46456024-46461023 Glycine max
Glyma.19G210500 5.0kb downstream 5.0kb downstream 9333 true Chr19: 46446691-46456023 Glycine max
Glyma.19G210500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46446691-46451690 Glycine max
Glyma.19G210500 10.0kb upstream 10.0kb upstream 14333 true Chr19: 46451691-46466023 Glycine max
Glyma.19G210500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46456024-46466023 Glycine max
Glyma.19G210500 10.0kb downstream 10.0kb downstream 14333 true Chr19: 46441691-46456023 Glycine max
Glyma.19G210500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46441691-46451690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300699 5265 Fabidae View MSA
124068228 5270 Rosid View MSA
123738584 5271 Pentapetalae View MSA
122788680 5272 Eudicot View MSA
122044076 5273 Angiosperm View MSA
121344334 5274 Embryophyte View MSA
123425104 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.27028 0.0 20.5124    
cufflinks 7.01505 0.0 19.881    
cufflinks 4.94497 0.0 14.5891   Low
cufflinks 9.02864 0.0 24.9362    
cufflinks 8.91983 0.0 24.696    
cufflinks 5.7411 0.0 16.6238   Low
cufflinks 11.838 0.0 32.1257   High
cufflinks 10.2641 0.0 28.0955   High
cufflinks 6.57207 0.0 18.7731    
cufflinks 2.548        
cufflinks 0.374       Low
cufflinks 2.695        
cufflinks 3.471       High
cufflinks 4.515       High
cufflinks 0.256       Low
cufflinks 1.563        
cufflinks 1.893        
cufflinks 3.234        
cufflinks 2.932        
cufflinks 1.214        
cufflinks 0.501       Low
cufflinks 1.46        
cufflinks 2.254        
cufflinks 0.396       Low
cufflinks 1.357        
cufflinks 0.979        

0 Strain