Gene : Glyma.19G242200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Genomic Order:  2422
Name:  ? Glyma.19G242200 Secondary Identifier:  ? PAC:30514323
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G242200 0.5kb upstream 0.5kb upstream 4035 true Chr19: 48994661-48998695 Glycine max
Glyma.19G242200 0.5kb upstream 0.5kb upstream 500 false Chr19: 48998196-48998695 Glycine max
Glyma.19G242200 0.5kb downstream 0.5kb downstream 4035 true Chr19: 48994161-48998195 Glycine max
Glyma.19G242200 0.5kb downstream 0.5kb downstream 500 false Chr19: 48994161-48994660 Glycine max
Glyma.19G242200 1.0kb upstream 1.0kb upstream 4535 true Chr19: 48994661-48999195 Glycine max
Glyma.19G242200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48998196-48999195 Glycine max
Glyma.19G242200 1.0kb downstream 1.0kb downstream 4535 true Chr19: 48993661-48998195 Glycine max
Glyma.19G242200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48993661-48994660 Glycine max
Glyma.19G242200 2.0kb upstream 2.0kb upstream 5535 true Chr19: 48994661-49000195 Glycine max
Glyma.19G242200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48998196-49000195 Glycine max
Glyma.19G242200 2.0kb downstream 2.0kb downstream 5535 true Chr19: 48992661-48998195 Glycine max
Glyma.19G242200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48992661-48994660 Glycine max
Glyma.19G242200 5.0kb upstream 5.0kb upstream 8535 true Chr19: 48994661-49003195 Glycine max
Glyma.19G242200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48998196-49003195 Glycine max
Glyma.19G242200 5.0kb downstream 5.0kb downstream 8535 true Chr19: 48989661-48998195 Glycine max
Glyma.19G242200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48989661-48994660 Glycine max
Glyma.19G242200 10.0kb upstream 10.0kb upstream 13535 true Chr19: 48994661-49008195 Glycine max
Glyma.19G242200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48998196-49008195 Glycine max
Glyma.19G242200 10.0kb downstream 10.0kb downstream 13535 true Chr19: 48984661-48998195 Glycine max
Glyma.19G242200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48984661-48994660 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311844 5265 Fabidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.0946 0.0 225.347 High Low
cufflinks 87.839 0.0 339.088 High  
cufflinks 72.362 0.0 260.3 High  
cufflinks 58.8732 0.0 182.433 High Low
cufflinks 102.419 0.0 405.484 High  
cufflinks 129.996 0.0 539.483 High High
cufflinks 98.1117 0.0 381.327 High  
cufflinks 100.455 0.0 343.847 High  
cufflinks 100.415 0.0 391.828 High  
cufflinks 10.082     High  
cufflinks 11.148     High  
cufflinks 8.998     High  
cufflinks 14.862     High High
cufflinks 19.996     High High
cufflinks 6.407     High Low
cufflinks 9.158     High  
cufflinks 7.681     High  
cufflinks 9.011     High  
cufflinks 10.429     High  
cufflinks 8.875     High  
cufflinks 10.255     High  
cufflinks 8.672     High  
cufflinks 7.563     High Low
cufflinks 11.126     High  
cufflinks 8.598     High  
cufflinks 11.981     High  

0 Strain