Gene : Glyma.19G243000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Genomic Order:  2430
Name:  ? Glyma.19G243000 Secondary Identifier:  ? PAC:30515137
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CALVIN-PWY Glycine max pathologic  
Gmax NONOXIPENT-PWY Glycine max pathologic  
Gmax PENTOSE-P-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G243000 0.5kb upstream 0.5kb upstream 2220 true Chr19: 49064912-49067131 Glycine max
Glyma.19G243000 0.5kb upstream 0.5kb upstream 500 false Chr19: 49066632-49067131 Glycine max
Glyma.19G243000 0.5kb downstream 0.5kb downstream 2220 true Chr19: 49064412-49066631 Glycine max
Glyma.19G243000 0.5kb downstream 0.5kb downstream 500 false Chr19: 49064412-49064911 Glycine max
Glyma.19G243000 1.0kb upstream 1.0kb upstream 2720 true Chr19: 49064912-49067631 Glycine max
Glyma.19G243000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49066632-49067631 Glycine max
Glyma.19G243000 1.0kb downstream 1.0kb downstream 2720 true Chr19: 49063912-49066631 Glycine max
Glyma.19G243000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49063912-49064911 Glycine max
Glyma.19G243000 2.0kb upstream 2.0kb upstream 3720 true Chr19: 49064912-49068631 Glycine max
Glyma.19G243000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49066632-49068631 Glycine max
Glyma.19G243000 2.0kb downstream 2.0kb downstream 3720 true Chr19: 49062912-49066631 Glycine max
Glyma.19G243000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49062912-49064911 Glycine max
Glyma.19G243000 5.0kb upstream 5.0kb upstream 6720 true Chr19: 49064912-49071631 Glycine max
Glyma.19G243000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49066632-49071631 Glycine max
Glyma.19G243000 5.0kb downstream 5.0kb downstream 6720 true Chr19: 49059912-49066631 Glycine max
Glyma.19G243000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49059912-49064911 Glycine max
Glyma.19G243000 10.0kb upstream 10.0kb upstream 11720 true Chr19: 49064912-49076631 Glycine max
Glyma.19G243000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49066632-49076631 Glycine max
Glyma.19G243000 10.0kb downstream 10.0kb downstream 11720 true Chr19: 49054912-49066631 Glycine max
Glyma.19G243000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49054912-49064911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303200 5265 Fabidae View MSA
124062390 5270 Rosid View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8271 0.0 29.2677    
cufflinks 7.72287 0.0 21.422   Low
cufflinks 15.6053 0.0 41.7435    
cufflinks 21.3319 0.0 56.9579 High High
cufflinks 18.0378 0.0 48.1261    
cufflinks 15.2106 0.0 40.6397    
cufflinks 19.095 0.0 50.9545    
cufflinks 14.8161 0.0 39.6272    
cufflinks 14.5726 0.0 38.9713    
cufflinks 5.272        
cufflinks 1.704        
cufflinks 7.936     High High
cufflinks 9.239     High High
cufflinks 8.915     High High
cufflinks 1.16       Low
cufflinks 3.137        
cufflinks 1.258       Low
cufflinks 7.76     High High
cufflinks 5.617        
cufflinks 2.056        
cufflinks 2.566        
cufflinks 1.588        
cufflinks 2.582        
cufflinks 1.134       Low
cufflinks 1.9        
cufflinks 2.107        

0 Strain