Gene : Glyma.19G244900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33162:SF1 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC Genomic Order:  2449
Name:  ? Glyma.19G244900 Secondary Identifier:  ? PAC:30514493
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G244900 0.5kb upstream 0.5kb upstream 1932 true Chr19: 49206227-49208158 Glycine max
Glyma.19G244900 0.5kb upstream 0.5kb upstream 500 false Chr19: 49206227-49206726 Glycine max
Glyma.19G244900 0.5kb downstream 0.5kb downstream 1932 true Chr19: 49206727-49208658 Glycine max
Glyma.19G244900 0.5kb downstream 0.5kb downstream 500 false Chr19: 49208159-49208658 Glycine max
Glyma.19G244900 1.0kb upstream 1.0kb upstream 2432 true Chr19: 49205727-49208158 Glycine max
Glyma.19G244900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49205727-49206726 Glycine max
Glyma.19G244900 1.0kb downstream 1.0kb downstream 2432 true Chr19: 49206727-49209158 Glycine max
Glyma.19G244900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49208159-49209158 Glycine max
Glyma.19G244900 2.0kb upstream 2.0kb upstream 3432 true Chr19: 49204727-49208158 Glycine max
Glyma.19G244900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49204727-49206726 Glycine max
Glyma.19G244900 2.0kb downstream 2.0kb downstream 3432 true Chr19: 49206727-49210158 Glycine max
Glyma.19G244900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49208159-49210158 Glycine max
Glyma.19G244900 5.0kb upstream 5.0kb upstream 6432 true Chr19: 49201727-49208158 Glycine max
Glyma.19G244900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49201727-49206726 Glycine max
Glyma.19G244900 5.0kb downstream 5.0kb downstream 6432 true Chr19: 49206727-49213158 Glycine max
Glyma.19G244900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49208159-49213158 Glycine max
Glyma.19G244900 10.0kb upstream 10.0kb upstream 11432 true Chr19: 49196727-49208158 Glycine max
Glyma.19G244900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49196727-49206726 Glycine max
Glyma.19G244900 10.0kb downstream 10.0kb downstream 11432 true Chr19: 49206727-49218158 Glycine max
Glyma.19G244900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49208159-49218158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311310 5265 Fabidae View MSA
124067421 5270 Rosid View MSA
123742518 5271 Pentapetalae View MSA
122797436 5272 Eudicot View MSA
122042839 5273 Angiosperm View MSA
123429010 5275 Viridiplantae View MSA
121350142 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.8043 0.0 87.7308 High High
cufflinks 15.831 0.0 44.2472    
cufflinks 14.1462 0.0 39.9771    
cufflinks 13.2241 0.0 37.6271    
cufflinks 9.92954 0.0 29.2029    
cufflinks 12.3829 0.0 35.4594    
cufflinks 16.9828 0.0 47.0978    
cufflinks 11.8418 0.0 34.1393    
cufflinks 9.17041 0.0 27.3392   Low
cufflinks 16.669     High  
cufflinks 8.919     High  
cufflinks 12.136     High  
cufflinks 6.774       Low
cufflinks 8.336     High Low
cufflinks 7.027     High Low
cufflinks 18.393     High  
cufflinks 21.597     High High
cufflinks 15.41     High  
cufflinks 11.489     High  
cufflinks 15.821     High  
cufflinks 9.333     High  
cufflinks 16.835     High  
cufflinks 25.362     High High
cufflinks 11.038     High  
cufflinks 17.203     High  
cufflinks 15.892     High  

0 Strain