Gene : Glyma.19G245400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00187//PF00967 - Chitin recognition protein (Chitin_bind_1) // Barwin family (Barwin) Genomic Order:  2454
Name:  ? Glyma.19G245400 Secondary Identifier:  ? PAC:30515134
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G245400 0.5kb upstream 0.5kb upstream 1669 true Chr19: 49238244-49239912 Glycine max
Glyma.19G245400 0.5kb upstream 0.5kb upstream 500 false Chr19: 49238244-49238743 Glycine max
Glyma.19G245400 0.5kb downstream 0.5kb downstream 1669 true Chr19: 49238744-49240412 Glycine max
Glyma.19G245400 0.5kb downstream 0.5kb downstream 500 false Chr19: 49239913-49240412 Glycine max
Glyma.19G245400 1.0kb upstream 1.0kb upstream 2169 true Chr19: 49237744-49239912 Glycine max
Glyma.19G245400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49237744-49238743 Glycine max
Glyma.19G245400 1.0kb downstream 1.0kb downstream 2169 true Chr19: 49238744-49240912 Glycine max
Glyma.19G245400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49239913-49240912 Glycine max
Glyma.19G245400 2.0kb upstream 2.0kb upstream 3169 true Chr19: 49236744-49239912 Glycine max
Glyma.19G245400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49236744-49238743 Glycine max
Glyma.19G245400 2.0kb downstream 2.0kb downstream 3169 true Chr19: 49238744-49241912 Glycine max
Glyma.19G245400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49239913-49241912 Glycine max
Glyma.19G245400 5.0kb upstream 5.0kb upstream 6169 true Chr19: 49233744-49239912 Glycine max
Glyma.19G245400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49233744-49238743 Glycine max
Glyma.19G245400 5.0kb downstream 5.0kb downstream 6169 true Chr19: 49238744-49244912 Glycine max
Glyma.19G245400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49239913-49244912 Glycine max
Glyma.19G245400 10.0kb upstream 10.0kb upstream 11169 true Chr19: 49228744-49239912 Glycine max
Glyma.19G245400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49228744-49238743 Glycine max
Glyma.19G245400 10.0kb downstream 10.0kb downstream 11169 true Chr19: 49238744-49249912 Glycine max
Glyma.19G245400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49239913-49249912 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311692 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 276.461 0.0 960.676 High High
cufflinks 26.85 0.0 71.7176 High  
cufflinks 68.941 0.0 190.43 High  
cufflinks 3.27014 0.0 10.802    
cufflinks 8.27604 0.0 23.89    
cufflinks 77.0698 0.0 215.867 High  
cufflinks 2.95203 0.0 9.85867    
cufflinks 2.54431 0.0 8.68481    
cufflinks 2.50206 0.0 8.53403    
cufflinks 6.498       Low
cufflinks 29.973     High  
cufflinks 74.013     High High
cufflinks 22.099     High  
cufflinks 28.997     High  
cufflinks 2.923       Low
cufflinks 18.965     High  
cufflinks 4.852       Low
cufflinks 17.661     High  
cufflinks 53.225     High High
cufflinks 25.378     High  
cufflinks 16.51     High  
cufflinks 17.526     High  
cufflinks 13.473     High  
cufflinks 48.122     High High
cufflinks 15.811     High  
cufflinks 15.335     High  

0 Strain