Gene : Glyma.19G238600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11759:SF12 - 40S RIBOSOMAL PROTEIN S14-1-RELATED Genomic Order:  2386
Name:  ? Glyma.19G238600 Secondary Identifier:  ? PAC:30513669
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G238600 0.5kb upstream 0.5kb upstream 2580 true Chr19: 48724879-48727458 Glycine max
Glyma.19G238600 0.5kb upstream 0.5kb upstream 500 false Chr19: 48724879-48725378 Glycine max
Glyma.19G238600 0.5kb downstream 0.5kb downstream 2580 true Chr19: 48725379-48727958 Glycine max
Glyma.19G238600 0.5kb downstream 0.5kb downstream 500 false Chr19: 48727459-48727958 Glycine max
Glyma.19G238600 1.0kb upstream 1.0kb upstream 3080 true Chr19: 48724379-48727458 Glycine max
Glyma.19G238600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48724379-48725378 Glycine max
Glyma.19G238600 1.0kb downstream 1.0kb downstream 3080 true Chr19: 48725379-48728458 Glycine max
Glyma.19G238600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48727459-48728458 Glycine max
Glyma.19G238600 2.0kb upstream 2.0kb upstream 4080 true Chr19: 48723379-48727458 Glycine max
Glyma.19G238600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48723379-48725378 Glycine max
Glyma.19G238600 2.0kb downstream 2.0kb downstream 4080 true Chr19: 48725379-48729458 Glycine max
Glyma.19G238600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48727459-48729458 Glycine max
Glyma.19G238600 5.0kb upstream 5.0kb upstream 7080 true Chr19: 48720379-48727458 Glycine max
Glyma.19G238600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48720379-48725378 Glycine max
Glyma.19G238600 5.0kb downstream 5.0kb downstream 7080 true Chr19: 48725379-48732458 Glycine max
Glyma.19G238600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48727459-48732458 Glycine max
Glyma.19G238600 10.0kb upstream 10.0kb upstream 12080 true Chr19: 48715379-48727458 Glycine max
Glyma.19G238600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48715379-48725378 Glycine max
Glyma.19G238600 10.0kb downstream 10.0kb downstream 12080 true Chr19: 48725379-48737458 Glycine max
Glyma.19G238600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48727459-48737458 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314462 5265 Fabidae View MSA
124067342 5270 Rosid View MSA
123748294 5271 Pentapetalae View MSA
122796164 5272 Eudicot View MSA
122046051 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 128.819 0.0 375.473 High  
cufflinks 127.077 0.0 370.34 High  
cufflinks 76.1379 0.0 209.675 High Low
cufflinks 101.482 0.0 287.853 High  
cufflinks 190.456 0.0 592.096 High High
cufflinks 148.16 0.0 440.079 High  
cufflinks 229.046 0.0 738.192 High High
cufflinks 124.549 0.0 363.172 High  
cufflinks 163.703 0.0 496.229 High  
cufflinks 48.517     High  
cufflinks 21.482     High Low
cufflinks 41.316     High  
cufflinks 90.451     High High
cufflinks 126.871     High High
cufflinks 22.84     High Low
cufflinks 38.272     High  
cufflinks 38.189     High  
cufflinks 43.594     High  
cufflinks 51.837     High  
cufflinks 28.457     High  
cufflinks 31.054     High  
cufflinks 30.49     High  
cufflinks 40.482     High  
cufflinks 23.874     High Low
cufflinks 34.721     High  
cufflinks 34.771     High  

0 Strain