Gene : Glyma.19G238800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11759:SF12 - 40S RIBOSOMAL PROTEIN S14-1-RELATED Genomic Order:  2388
Name:  ? Glyma.19G238800 Secondary Identifier:  ? PAC:30514413
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G238800 0.5kb upstream 0.5kb upstream 2715 true Chr19: 48732142-48734856 Glycine max
Glyma.19G238800 0.5kb upstream 0.5kb upstream 500 false Chr19: 48732142-48732641 Glycine max
Glyma.19G238800 0.5kb downstream 0.5kb downstream 2715 true Chr19: 48732642-48735356 Glycine max
Glyma.19G238800 0.5kb downstream 0.5kb downstream 500 false Chr19: 48734857-48735356 Glycine max
Glyma.19G238800 1.0kb upstream 1.0kb upstream 3215 true Chr19: 48731642-48734856 Glycine max
Glyma.19G238800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48731642-48732641 Glycine max
Glyma.19G238800 1.0kb downstream 1.0kb downstream 3215 true Chr19: 48732642-48735856 Glycine max
Glyma.19G238800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48734857-48735856 Glycine max
Glyma.19G238800 2.0kb upstream 2.0kb upstream 4215 true Chr19: 48730642-48734856 Glycine max
Glyma.19G238800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48730642-48732641 Glycine max
Glyma.19G238800 2.0kb downstream 2.0kb downstream 4215 true Chr19: 48732642-48736856 Glycine max
Glyma.19G238800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48734857-48736856 Glycine max
Glyma.19G238800 5.0kb upstream 5.0kb upstream 7215 true Chr19: 48727642-48734856 Glycine max
Glyma.19G238800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48727642-48732641 Glycine max
Glyma.19G238800 5.0kb downstream 5.0kb downstream 7215 true Chr19: 48732642-48739856 Glycine max
Glyma.19G238800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48734857-48739856 Glycine max
Glyma.19G238800 10.0kb upstream 10.0kb upstream 12215 true Chr19: 48722642-48734856 Glycine max
Glyma.19G238800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48722642-48732641 Glycine max
Glyma.19G238800 10.0kb downstream 10.0kb downstream 12215 true Chr19: 48732642-48744856 Glycine max
Glyma.19G238800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48734857-48744856 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247580 5265 Fabidae Singleton cluster - no MSA
124067342 5270 Rosid View MSA
123748294 5271 Pentapetalae View MSA
122796164 5272 Eudicot View MSA
122046051 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.5147 0.0 197.472 High  
cufflinks 107.384 0.0 303.142 High  
cufflinks 40.6688 0.0 108.533 High Low
cufflinks 57.087 0.0 153.61 High Low
cufflinks 193.086 0.0 594.033 High High
cufflinks 156.838 0.0 464.797 High  
cufflinks 204.019 0.0 633.33 High High
cufflinks 91.3889 0.0 254.327 High  
cufflinks 118.859 0.0 340.841 High  
cufflinks 22.622     High  
cufflinks 6.868     High Low
cufflinks 14.335     High  
cufflinks 55.834     High High
cufflinks 82.653     High High
cufflinks 8.306     High Low
cufflinks 17.756     High  
cufflinks 12.593     High  
cufflinks 16.307     High  
cufflinks 25.284     High  
cufflinks 13.285     High  
cufflinks 11.293     High  
cufflinks 12.625     High  
cufflinks 21.63     High  
cufflinks 7.68     High Low
cufflinks 16.915     High  
cufflinks 14.55     High  

0 Strain