Gene : Glyma.19G241400 G. max Wm82.a2.v1
Defline:  (1 of 3) PF02810 - SEC-C motif (SEC-C) Genomic Order:  2414
Name:  ? Glyma.19G241400 Secondary Identifier:  ? PAC:30511214
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G241400 0.5kb upstream 0.5kb upstream 2964 true Chr19: 48936476-48939439 Glycine max
Glyma.19G241400 0.5kb upstream 0.5kb upstream 500 false Chr19: 48936476-48936975 Glycine max
Glyma.19G241400 0.5kb downstream 0.5kb downstream 2964 true Chr19: 48936976-48939939 Glycine max
Glyma.19G241400 0.5kb downstream 0.5kb downstream 500 false Chr19: 48939440-48939939 Glycine max
Glyma.19G241400 1.0kb upstream 1.0kb upstream 3464 true Chr19: 48935976-48939439 Glycine max
Glyma.19G241400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48935976-48936975 Glycine max
Glyma.19G241400 1.0kb downstream 1.0kb downstream 3464 true Chr19: 48936976-48940439 Glycine max
Glyma.19G241400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48939440-48940439 Glycine max
Glyma.19G241400 2.0kb upstream 2.0kb upstream 4464 true Chr19: 48934976-48939439 Glycine max
Glyma.19G241400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48934976-48936975 Glycine max
Glyma.19G241400 2.0kb downstream 2.0kb downstream 4464 true Chr19: 48936976-48941439 Glycine max
Glyma.19G241400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48939440-48941439 Glycine max
Glyma.19G241400 5.0kb upstream 5.0kb upstream 7464 true Chr19: 48931976-48939439 Glycine max
Glyma.19G241400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48931976-48936975 Glycine max
Glyma.19G241400 5.0kb downstream 5.0kb downstream 7464 true Chr19: 48936976-48944439 Glycine max
Glyma.19G241400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48939440-48944439 Glycine max
Glyma.19G241400 10.0kb upstream 10.0kb upstream 12464 true Chr19: 48926976-48939439 Glycine max
Glyma.19G241400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48926976-48936975 Glycine max
Glyma.19G241400 10.0kb downstream 10.0kb downstream 12464 true Chr19: 48936976-48949439 Glycine max
Glyma.19G241400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48939440-48949439 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300047 5265 Fabidae View MSA
124067715 5270 Rosid View MSA
123737738 5271 Pentapetalae View MSA
122786470 5272 Eudicot View MSA
122045025 5273 Angiosperm View MSA
121346547 5274 Embryophyte View MSA
123380401 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.3749 0.0 13.3534    
cufflinks 3.82187 0.0 11.8815    
cufflinks 1.99185 0.0 6.75394   Low
cufflinks 3.88311 0.0 12.019    
cufflinks 4.52268 0.0 13.6852    
cufflinks 3.66006 0.0 11.434    
cufflinks 8.57531 0.0 24.0089   High
cufflinks 2.57195 0.0 8.43044   Low
cufflinks 4.63301 0.0 13.9846    
cufflinks 1.755        
cufflinks 1.003       Low
cufflinks 1.84        
cufflinks 3.856       High
cufflinks 5.208       High
cufflinks 1.687        
cufflinks 2.58        
cufflinks 0.815       Low
cufflinks 2.285        
cufflinks 2.197        
cufflinks 3.105        
cufflinks 1.468        
cufflinks 2.85        
cufflinks 3.239        
cufflinks 1.307        
cufflinks 2.744        
cufflinks 1.158       Low

0 Strain