Gene : Glyma.19G233300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10653 - F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA Genomic Order:  2333
Name:  ? Glyma.19G233300 Secondary Identifier:  ? PAC:30511478
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G233300 0.5kb upstream 0.5kb upstream 4273 true Chr19: 48317190-48321462 Glycine max
Glyma.19G233300 0.5kb upstream 0.5kb upstream 500 false Chr19: 48320963-48321462 Glycine max
Glyma.19G233300 0.5kb downstream 0.5kb downstream 4273 true Chr19: 48316690-48320962 Glycine max
Glyma.19G233300 0.5kb downstream 0.5kb downstream 500 false Chr19: 48316690-48317189 Glycine max
Glyma.19G233300 1.0kb upstream 1.0kb upstream 4773 true Chr19: 48317190-48321962 Glycine max
Glyma.19G233300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48320963-48321962 Glycine max
Glyma.19G233300 1.0kb downstream 1.0kb downstream 4773 true Chr19: 48316190-48320962 Glycine max
Glyma.19G233300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48316190-48317189 Glycine max
Glyma.19G233300 2.0kb upstream 2.0kb upstream 5773 true Chr19: 48317190-48322962 Glycine max
Glyma.19G233300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48320963-48322962 Glycine max
Glyma.19G233300 2.0kb downstream 2.0kb downstream 5773 true Chr19: 48315190-48320962 Glycine max
Glyma.19G233300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48315190-48317189 Glycine max
Glyma.19G233300 5.0kb upstream 5.0kb upstream 8773 true Chr19: 48317190-48325962 Glycine max
Glyma.19G233300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48320963-48325962 Glycine max
Glyma.19G233300 5.0kb downstream 5.0kb downstream 8773 true Chr19: 48312190-48320962 Glycine max
Glyma.19G233300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48312190-48317189 Glycine max
Glyma.19G233300 10.0kb upstream 10.0kb upstream 13773 true Chr19: 48317190-48330962 Glycine max
Glyma.19G233300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48320963-48330962 Glycine max
Glyma.19G233300 10.0kb downstream 10.0kb downstream 13773 true Chr19: 48307190-48320962 Glycine max
Glyma.19G233300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48307190-48317189 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308271 5265 Fabidae View MSA
124063907 5270 Rosid View MSA
123748268 5271 Pentapetalae View MSA
122793557 5272 Eudicot View MSA
122047118 5273 Angiosperm View MSA
121348843 5274 Embryophyte View MSA
123381036 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8486 0.0 37.3716   Low
cufflinks 22.1499 0.0 59.0932 High  
cufflinks 19.9892 0.0 53.3528    
cufflinks 27.5136 0.0 73.6014 High  
cufflinks 20.3061 0.0 54.1959 High  
cufflinks 26.2344 0.0 70.0927 High  
cufflinks 16.27 0.0 43.6408    
cufflinks 50.0111 0.0 138.466 High High
cufflinks 19.398 0.0 51.7976    
cufflinks 15.309     High High
cufflinks 3.283       Low
cufflinks 7.38     High  
cufflinks 8.205     High  
cufflinks 7.58     High  
cufflinks 3.696       Low
cufflinks 6.858        
cufflinks 3.625       Low
cufflinks 7.303     High  
cufflinks 6.853        
cufflinks 6.672        
cufflinks 5.007        
cufflinks 6.739        
cufflinks 6.849        
cufflinks 3.748       Low
cufflinks 6.434        
cufflinks 4.304        

0 Strain