Gene : Glyma.19G228100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Genomic Order:  2281
Name:  ? Glyma.19G228100 Secondary Identifier:  ? PAC:30513222
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G228100 0.5kb upstream 0.5kb upstream 16375 true Chr19: 47938072-47954446 Glycine max
Glyma.19G228100 0.5kb upstream 0.5kb upstream 500 false Chr19: 47953947-47954446 Glycine max
Glyma.19G228100 0.5kb downstream 0.5kb downstream 16375 true Chr19: 47937572-47953946 Glycine max
Glyma.19G228100 0.5kb downstream 0.5kb downstream 500 false Chr19: 47937572-47938071 Glycine max
Glyma.19G228100 1.0kb upstream 1.0kb upstream 16875 true Chr19: 47938072-47954946 Glycine max
Glyma.19G228100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47953947-47954946 Glycine max
Glyma.19G228100 1.0kb downstream 1.0kb downstream 16875 true Chr19: 47937072-47953946 Glycine max
Glyma.19G228100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47937072-47938071 Glycine max
Glyma.19G228100 2.0kb upstream 2.0kb upstream 17875 true Chr19: 47938072-47955946 Glycine max
Glyma.19G228100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47953947-47955946 Glycine max
Glyma.19G228100 2.0kb downstream 2.0kb downstream 17875 true Chr19: 47936072-47953946 Glycine max
Glyma.19G228100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47936072-47938071 Glycine max
Glyma.19G228100 5.0kb upstream 5.0kb upstream 20875 true Chr19: 47938072-47958946 Glycine max
Glyma.19G228100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47953947-47958946 Glycine max
Glyma.19G228100 5.0kb downstream 5.0kb downstream 20875 true Chr19: 47933072-47953946 Glycine max
Glyma.19G228100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47933072-47938071 Glycine max
Glyma.19G228100 10.0kb upstream 10.0kb upstream 25875 true Chr19: 47938072-47963946 Glycine max
Glyma.19G228100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47953947-47963946 Glycine max
Glyma.19G228100 10.0kb downstream 10.0kb downstream 25875 true Chr19: 47928072-47953946 Glycine max
Glyma.19G228100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47928072-47938071 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307944 5265 Fabidae View MSA
124061821 5270 Rosid View MSA
123738220 5271 Pentapetalae View MSA
122791957 5272 Eudicot View MSA
122045545 5273 Angiosperm View MSA
121344025 5274 Embryophyte View MSA
123424859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1449 0.0 29.9252   High
cufflinks 5.14117 0.0 13.8366   High
cufflinks 1.52158 0.0 4.60736    
cufflinks 2.33608 0.0 6.7026    
cufflinks 0.64928 0.0 2.21542    
cufflinks 0.553353 0.0 1.91613   Low
cufflinks 1.3457 0.0 4.16937    
cufflinks 1.51509 0.0 4.60196    
cufflinks 0.804091 0.0 2.67053    
cufflinks 0.774        
cufflinks 0.275        
cufflinks 0.675        
cufflinks 0.136       Low
cufflinks 0.125       Low
cufflinks 0.281        
cufflinks 5.225       High
cufflinks 0.09       Low
cufflinks 0.975        
cufflinks 1.477        
cufflinks 6.869       High
cufflinks 0.195        
cufflinks 5.529       High
cufflinks 2.655        
cufflinks 0.249        
cufflinks 6.339       High
cufflinks 0.275        

0 Strain