Gene : Glyma.19G228300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  2283
Name:  ? Glyma.19G228300 Secondary Identifier:  ? PAC:30514792
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G228300 0.5kb upstream 0.5kb upstream 6485 true Chr19: 47976489-47982973 Glycine max
Glyma.19G228300 0.5kb upstream 0.5kb upstream 500 false Chr19: 47976489-47976988 Glycine max
Glyma.19G228300 0.5kb downstream 0.5kb downstream 6485 true Chr19: 47976989-47983473 Glycine max
Glyma.19G228300 0.5kb downstream 0.5kb downstream 500 false Chr19: 47982974-47983473 Glycine max
Glyma.19G228300 1.0kb upstream 1.0kb upstream 6985 true Chr19: 47975989-47982973 Glycine max
Glyma.19G228300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47975989-47976988 Glycine max
Glyma.19G228300 1.0kb downstream 1.0kb downstream 6985 true Chr19: 47976989-47983973 Glycine max
Glyma.19G228300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47982974-47983973 Glycine max
Glyma.19G228300 2.0kb upstream 2.0kb upstream 7985 true Chr19: 47974989-47982973 Glycine max
Glyma.19G228300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47974989-47976988 Glycine max
Glyma.19G228300 2.0kb downstream 2.0kb downstream 7985 true Chr19: 47976989-47984973 Glycine max
Glyma.19G228300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47982974-47984973 Glycine max
Glyma.19G228300 5.0kb upstream 5.0kb upstream 10985 true Chr19: 47971989-47982973 Glycine max
Glyma.19G228300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47971989-47976988 Glycine max
Glyma.19G228300 5.0kb downstream 5.0kb downstream 10985 true Chr19: 47976989-47987973 Glycine max
Glyma.19G228300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47982974-47987973 Glycine max
Glyma.19G228300 10.0kb upstream 10.0kb upstream 15985 true Chr19: 47966989-47982973 Glycine max
Glyma.19G228300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47966989-47976988 Glycine max
Glyma.19G228300 10.0kb downstream 10.0kb downstream 15985 true Chr19: 47976989-47992973 Glycine max
Glyma.19G228300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47982974-47992973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253961 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31475 0.0 7.42789   Low
cufflinks 4.932 0.0 18.9228    
cufflinks 9.39856 0.0 36.6623    
cufflinks 11.04 0.0 42.7473    
cufflinks 4.26658 0.0 21.0656    
cufflinks 1.66253 0.0 8.89195   Low
cufflinks 3.06022 0.0 15.3836    
cufflinks 17.9575 0.0 68.4951   High
cufflinks 4.12876 0.0 21.7219    
cufflinks 1.607       High
cufflinks 0.258        
cufflinks 1.033       High
cufflinks 0.407        
cufflinks 0.241        
cufflinks 0.066       Low
cufflinks 0.059     Low Low
cufflinks 1.002       High
cufflinks 0.884       High
cufflinks 0.66        
cufflinks 0.049     Low Low
cufflinks 0.251        
cufflinks 0.081     Low Low
cufflinks 0.469        
cufflinks 0.354        
cufflinks 0.074     Low Low
cufflinks 0.505        

0 Strain