Gene : Glyma.19G228400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32266:SF12 - NICOTIANAMINE SYNTHASE-RELATED Genomic Order:  2284
Name:  ? Glyma.19G228400 Secondary Identifier:  ? PAC:30511355
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5957 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G228400 0.5kb upstream 0.5kb upstream 1914 true Chr19: 47988378-47990291 Glycine max
Glyma.19G228400 0.5kb upstream 0.5kb upstream 500 false Chr19: 47989792-47990291 Glycine max
Glyma.19G228400 0.5kb downstream 0.5kb downstream 1914 true Chr19: 47987878-47989791 Glycine max
Glyma.19G228400 0.5kb downstream 0.5kb downstream 500 false Chr19: 47987878-47988377 Glycine max
Glyma.19G228400 1.0kb upstream 1.0kb upstream 2414 true Chr19: 47988378-47990791 Glycine max
Glyma.19G228400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47989792-47990791 Glycine max
Glyma.19G228400 1.0kb downstream 1.0kb downstream 2414 true Chr19: 47987378-47989791 Glycine max
Glyma.19G228400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47987378-47988377 Glycine max
Glyma.19G228400 2.0kb upstream 2.0kb upstream 3414 true Chr19: 47988378-47991791 Glycine max
Glyma.19G228400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47989792-47991791 Glycine max
Glyma.19G228400 2.0kb downstream 2.0kb downstream 3414 true Chr19: 47986378-47989791 Glycine max
Glyma.19G228400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47986378-47988377 Glycine max
Glyma.19G228400 5.0kb upstream 5.0kb upstream 6414 true Chr19: 47988378-47994791 Glycine max
Glyma.19G228400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47989792-47994791 Glycine max
Glyma.19G228400 5.0kb downstream 5.0kb downstream 6414 true Chr19: 47983378-47989791 Glycine max
Glyma.19G228400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47983378-47988377 Glycine max
Glyma.19G228400 10.0kb upstream 10.0kb upstream 11414 true Chr19: 47988378-47999791 Glycine max
Glyma.19G228400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47989792-47999791 Glycine max
Glyma.19G228400 10.0kb downstream 10.0kb downstream 11414 true Chr19: 47978378-47989791 Glycine max
Glyma.19G228400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47978378-47988377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302386 5265 Fabidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.78979 0.0 20.0157    
cufflinks 0.074537 0.0 0.304094 Low Low
cufflinks 2.51081 0.0 8.48929    
cufflinks 0.104775 0.0 0.421056 Low  
cufflinks 6.24821 0.0 18.6084    
cufflinks 3.15543 0.0 10.3349    
cufflinks 0.0165506 0.0 0.0758053 Low Low
cufflinks 5.45175 0.0 16.5112    
cufflinks 4.75302 0.0 14.6912    
cufflinks 0.065     Low  
cufflinks 0.137        
cufflinks 2.336       High
cufflinks 1.33       High
cufflinks 0.722        
cufflinks 0.727        
cufflinks 0.012     Low Low
cufflinks 0.254        
cufflinks 0.781        
cufflinks 0.022     Low Low
cufflinks 0.098        
cufflinks 0.196        
cufflinks 0.255        
cufflinks 0.011     Low Low
cufflinks 0.275        
cufflinks 0.046     Low  
cufflinks 0.288        

0 Strain