Gene : Glyma.19G230500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Genomic Order:  2305
Name:  ? Glyma.19G230500 Secondary Identifier:  ? PAC:30513479
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G230500 0.5kb upstream 0.5kb upstream 9980 true Chr19: 48122051-48132030 Glycine max
Glyma.19G230500 0.5kb upstream 0.5kb upstream 500 false Chr19: 48131531-48132030 Glycine max
Glyma.19G230500 0.5kb downstream 0.5kb downstream 9980 true Chr19: 48121551-48131530 Glycine max
Glyma.19G230500 0.5kb downstream 0.5kb downstream 500 false Chr19: 48121551-48122050 Glycine max
Glyma.19G230500 1.0kb upstream 1.0kb upstream 10480 true Chr19: 48122051-48132530 Glycine max
Glyma.19G230500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48131531-48132530 Glycine max
Glyma.19G230500 1.0kb downstream 1.0kb downstream 10480 true Chr19: 48121051-48131530 Glycine max
Glyma.19G230500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48121051-48122050 Glycine max
Glyma.19G230500 2.0kb upstream 2.0kb upstream 11480 true Chr19: 48122051-48133530 Glycine max
Glyma.19G230500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48131531-48133530 Glycine max
Glyma.19G230500 2.0kb downstream 2.0kb downstream 11480 true Chr19: 48120051-48131530 Glycine max
Glyma.19G230500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48120051-48122050 Glycine max
Glyma.19G230500 5.0kb upstream 5.0kb upstream 14480 true Chr19: 48122051-48136530 Glycine max
Glyma.19G230500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48131531-48136530 Glycine max
Glyma.19G230500 5.0kb downstream 5.0kb downstream 14480 true Chr19: 48117051-48131530 Glycine max
Glyma.19G230500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48117051-48122050 Glycine max
Glyma.19G230500 10.0kb upstream 10.0kb upstream 19480 true Chr19: 48122051-48141530 Glycine max
Glyma.19G230500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48131531-48141530 Glycine max
Glyma.19G230500 10.0kb downstream 10.0kb downstream 19480 true Chr19: 48112051-48131530 Glycine max
Glyma.19G230500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48112051-48122050 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122313709 5265 Fabidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.491493 0.0 2.71381   Low
cufflinks 2.55448 0.0 10.076    
cufflinks 1.3292 0.0 6.47621    
cufflinks 2.31129 0.0 10.4547    
cufflinks 5.64068 0.0 25.3489    
cufflinks 8.96491 0.0 39.8765   High
cufflinks 4.66474 0.0 18.3131    
cufflinks 4.37839 0.0 20.3468    
cufflinks 7.11551 0.0 31.7097    
cufflinks 0.16        
cufflinks 1.26       High
cufflinks 0.331        
cufflinks 0.47        
cufflinks 0.373        
cufflinks 0.509        
cufflinks 0.114       Low
cufflinks 0.847        
cufflinks 0.358        
cufflinks 0.272        
cufflinks 0.12       Low
cufflinks 1.008       High
cufflinks 0.125       Low
cufflinks 0.126       Low
cufflinks 1.197       High
cufflinks 0.085     Low Low
cufflinks 1.135       High

0 Strain