Gene : Glyma.20G001800 G. max Wm82.a2.v1
Genomic Order:  18 Name:  ? Glyma.20G001800
Secondary Identifier:  ? PAC:30521436
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G001800 0.5kb upstream 0.5kb upstream 2969 true Chr20: 200943-203911 Glycine max
Glyma.20G001800 0.5kb upstream 0.5kb upstream 500 false Chr20: 200943-201442 Glycine max
Glyma.20G001800 0.5kb downstream 0.5kb downstream 2969 true Chr20: 201443-204411 Glycine max
Glyma.20G001800 0.5kb downstream 0.5kb downstream 500 false Chr20: 203912-204411 Glycine max
Glyma.20G001800 1.0kb upstream 1.0kb upstream 3469 true Chr20: 200443-203911 Glycine max
Glyma.20G001800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 200443-201442 Glycine max
Glyma.20G001800 1.0kb downstream 1.0kb downstream 3469 true Chr20: 201443-204911 Glycine max
Glyma.20G001800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 203912-204911 Glycine max
Glyma.20G001800 2.0kb upstream 2.0kb upstream 4469 true Chr20: 199443-203911 Glycine max
Glyma.20G001800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 199443-201442 Glycine max
Glyma.20G001800 2.0kb downstream 2.0kb downstream 4469 true Chr20: 201443-205911 Glycine max
Glyma.20G001800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 203912-205911 Glycine max
Glyma.20G001800 5.0kb upstream 5.0kb upstream 7469 true Chr20: 196443-203911 Glycine max
Glyma.20G001800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 196443-201442 Glycine max
Glyma.20G001800 5.0kb downstream 5.0kb downstream 7469 true Chr20: 201443-208911 Glycine max
Glyma.20G001800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 203912-208911 Glycine max
Glyma.20G001800 10.0kb upstream 10.0kb upstream 12469 true Chr20: 191443-203911 Glycine max
Glyma.20G001800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 191443-201442 Glycine max
Glyma.20G001800 10.0kb downstream 10.0kb downstream 12469 true Chr20: 201443-213911 Glycine max
Glyma.20G001800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 203912-213911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299095 5265 Fabidae View MSA
124062435 5270 Rosid View MSA
123741504 5271 Pentapetalae View MSA
122770066 5272 Eudicot View MSA
122043359 5273 Angiosperm View MSA
121310110 5274 Embryophyte View MSA
123347689 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.39813 0.0 1.49962    
cufflinks 0.365287 0.0 1.38019    
cufflinks 0.133252 0.0 0.524646 Low Low
cufflinks 5.36729 0.0 15.6998    
cufflinks 1.14907 0.0 4.07616    
cufflinks 0.28086 0.0 1.07353 Low  
cufflinks 10.8075 0.0 29.5205   High
cufflinks 6.20634 0.0 17.8025   High
cufflinks 1.46184 0.0 5.0698    
cufflinks 1.553       High
cufflinks 0.007     Low Low
cufflinks 0.116     Low  
cufflinks 0.616        
cufflinks 0.074        
cufflinks 0.023     Low Low
cufflinks 0.339        
cufflinks 0.219        
cufflinks 0.186        
cufflinks 0.446        
cufflinks 0.409        
cufflinks 0.045     Low  
cufflinks 0.441        
cufflinks 0.281        
cufflinks 0.022     Low Low
cufflinks 0.321        
cufflinks 0.088        

0 Strain