Gene : Glyma.20G002200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15818 - G PATCH AND KOW-CONTAINING Genomic Order:  22
Name:  ? Glyma.20G002200 Secondary Identifier:  ? PAC:30522268
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G002200 0.5kb upstream 0.5kb upstream 2187 true Chr20: 225935-228121 Glycine max
Glyma.20G002200 0.5kb upstream 0.5kb upstream 500 false Chr20: 225935-226434 Glycine max
Glyma.20G002200 0.5kb downstream 0.5kb downstream 2187 true Chr20: 226435-228621 Glycine max
Glyma.20G002200 0.5kb downstream 0.5kb downstream 500 false Chr20: 228122-228621 Glycine max
Glyma.20G002200 1.0kb upstream 1.0kb upstream 2687 true Chr20: 225435-228121 Glycine max
Glyma.20G002200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 225435-226434 Glycine max
Glyma.20G002200 1.0kb downstream 1.0kb downstream 2687 true Chr20: 226435-229121 Glycine max
Glyma.20G002200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 228122-229121 Glycine max
Glyma.20G002200 2.0kb upstream 2.0kb upstream 3687 true Chr20: 224435-228121 Glycine max
Glyma.20G002200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 224435-226434 Glycine max
Glyma.20G002200 2.0kb downstream 2.0kb downstream 3687 true Chr20: 226435-230121 Glycine max
Glyma.20G002200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 228122-230121 Glycine max
Glyma.20G002200 5.0kb upstream 5.0kb upstream 6687 true Chr20: 221435-228121 Glycine max
Glyma.20G002200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 221435-226434 Glycine max
Glyma.20G002200 5.0kb downstream 5.0kb downstream 6687 true Chr20: 226435-233121 Glycine max
Glyma.20G002200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 228122-233121 Glycine max
Glyma.20G002200 10.0kb upstream 10.0kb upstream 11687 true Chr20: 216435-228121 Glycine max
Glyma.20G002200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 216435-226434 Glycine max
Glyma.20G002200 10.0kb downstream 10.0kb downstream 11687 true Chr20: 226435-238121 Glycine max
Glyma.20G002200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 228122-238121 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303537 5265 Fabidae View MSA
124064997 5270 Rosid View MSA
123746518 5271 Pentapetalae View MSA
122790026 5272 Eudicot View MSA
122046312 5273 Angiosperm View MSA
121346621 5274 Embryophyte View MSA
123426074 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.58923 0.0 13.0284   High
cufflinks 2.35139 0.0 7.33444    
cufflinks 2.34376 0.0 7.28516    
cufflinks 2.76277 0.0 8.3848    
cufflinks 2.65644 0.0 8.09496    
cufflinks 1.85347 0.0 5.96646   Low
cufflinks 3.45007 0.0 10.1303    
cufflinks 2.78806 0.0 8.46777    
cufflinks 2.82837 0.0 8.57815    
cufflinks 4.666       Low
cufflinks 8.674     High  
cufflinks 7.372     High  
cufflinks 4.738       Low
cufflinks 5.494       Low
cufflinks 7.134     High  
cufflinks 7.933     High  
cufflinks 8.561     High  
cufflinks 5.854        
cufflinks 5.871        
cufflinks 9.331     High High
cufflinks 6.872     High  
cufflinks 8.961     High High
cufflinks 8.006     High  
cufflinks 5.755        
cufflinks 8.946     High High
cufflinks 7.322     High  

0 Strain