Gene : Glyma.19G261300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31140:SF4 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED Genomic Order:  2613
Name:  ? Glyma.19G261300 Secondary Identifier:  ? PAC:30514678
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G261300 0.5kb upstream 0.5kb upstream 6223 true Chr19: 50456592-50462814 Glycine max
Glyma.19G261300 0.5kb upstream 0.5kb upstream 500 false Chr19: 50456592-50457091 Glycine max
Glyma.19G261300 0.5kb downstream 0.5kb downstream 6223 true Chr19: 50457092-50463314 Glycine max
Glyma.19G261300 0.5kb downstream 0.5kb downstream 500 false Chr19: 50462815-50463314 Glycine max
Glyma.19G261300 1.0kb upstream 1.0kb upstream 6723 true Chr19: 50456092-50462814 Glycine max
Glyma.19G261300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 50456092-50457091 Glycine max
Glyma.19G261300 1.0kb downstream 1.0kb downstream 6723 true Chr19: 50457092-50463814 Glycine max
Glyma.19G261300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 50462815-50463814 Glycine max
Glyma.19G261300 2.0kb upstream 2.0kb upstream 7723 true Chr19: 50455092-50462814 Glycine max
Glyma.19G261300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 50455092-50457091 Glycine max
Glyma.19G261300 2.0kb downstream 2.0kb downstream 7723 true Chr19: 50457092-50464814 Glycine max
Glyma.19G261300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 50462815-50464814 Glycine max
Glyma.19G261300 5.0kb upstream 5.0kb upstream 10723 true Chr19: 50452092-50462814 Glycine max
Glyma.19G261300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 50452092-50457091 Glycine max
Glyma.19G261300 5.0kb downstream 5.0kb downstream 10723 true Chr19: 50457092-50467814 Glycine max
Glyma.19G261300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 50462815-50467814 Glycine max
Glyma.19G261300 10.0kb upstream 10.0kb upstream 15723 true Chr19: 50447092-50462814 Glycine max
Glyma.19G261300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 50447092-50457091 Glycine max
Glyma.19G261300 10.0kb downstream 10.0kb downstream 15723 true Chr19: 50457092-50472814 Glycine max
Glyma.19G261300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 50462815-50472814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254626 5265 Fabidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1527 0.0 53.0142   High
cufflinks 2.52717 0.0 14.4111    
cufflinks 5.1659 0.0 21.0719    
cufflinks 0.82503 0.0 4.30809    
cufflinks 1.72118 0.0 8.49176    
cufflinks 0.536139 0.0 4.37599    
cufflinks 0.846504 0.0 5.98451    
cufflinks 0.156376 0.0 0.78059 Low Low
cufflinks 5.63587 0.0 19.8031    
cufflinks 0.004     Low Low
cufflinks 0.027     Low  
cufflinks 0.475        
cufflinks 0.003     Low Low
cufflinks 0.001     Low Low
cufflinks 1.218        
cufflinks 2.061       High
cufflinks 0.033     Low  
cufflinks 0.7        
cufflinks 0.511        
cufflinks 2.153       High
cufflinks 0.028     Low  
cufflinks 1.793       High
cufflinks 0.79        
cufflinks 0.056     Low  
cufflinks 2.035       High
cufflinks 0.015     Low  

0 Strain