Gene : Glyma.19G252600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22952:SF144 - G-BOX-BINDING FACTOR 2-RELATED Genomic Order:  2526
Name:  ? Glyma.19G252600 Secondary Identifier:  ? PAC:30512419
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G252600 0.5kb upstream 0.5kb upstream 6910 true Chr19: 49805653-49812562 Glycine max
Glyma.19G252600 0.5kb upstream 0.5kb upstream 500 false Chr19: 49805653-49806152 Glycine max
Glyma.19G252600 0.5kb downstream 0.5kb downstream 6910 true Chr19: 49806153-49813062 Glycine max
Glyma.19G252600 0.5kb downstream 0.5kb downstream 500 false Chr19: 49812563-49813062 Glycine max
Glyma.19G252600 1.0kb upstream 1.0kb upstream 7410 true Chr19: 49805153-49812562 Glycine max
Glyma.19G252600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49805153-49806152 Glycine max
Glyma.19G252600 1.0kb downstream 1.0kb downstream 7410 true Chr19: 49806153-49813562 Glycine max
Glyma.19G252600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49812563-49813562 Glycine max
Glyma.19G252600 2.0kb upstream 2.0kb upstream 8410 true Chr19: 49804153-49812562 Glycine max
Glyma.19G252600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49804153-49806152 Glycine max
Glyma.19G252600 2.0kb downstream 2.0kb downstream 8410 true Chr19: 49806153-49814562 Glycine max
Glyma.19G252600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49812563-49814562 Glycine max
Glyma.19G252600 5.0kb upstream 5.0kb upstream 11410 true Chr19: 49801153-49812562 Glycine max
Glyma.19G252600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49801153-49806152 Glycine max
Glyma.19G252600 5.0kb downstream 5.0kb downstream 11410 true Chr19: 49806153-49817562 Glycine max
Glyma.19G252600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49812563-49817562 Glycine max
Glyma.19G252600 10.0kb upstream 10.0kb upstream 16410 true Chr19: 49796153-49812562 Glycine max
Glyma.19G252600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49796153-49806152 Glycine max
Glyma.19G252600 10.0kb downstream 10.0kb downstream 16410 true Chr19: 49806153-49822562 Glycine max
Glyma.19G252600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49812563-49822562 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309767 5265 Fabidae View MSA
124060695 5270 Rosid View MSA
123750694 5271 Pentapetalae View MSA
122796878 5272 Eudicot View MSA
122043515 5273 Angiosperm View MSA
121310141 5274 Embryophyte View MSA
123347711 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9123 0.0 69.4925   High
cufflinks 7.97412 0.0 36.2947    
cufflinks 12.1454 0.0 52.9601    
cufflinks 6.38253 0.0 28.0469   Low
cufflinks 10.4683 0.0 46.3784    
cufflinks 13.2329 0.0 58.0551    
cufflinks 5.71279 0.0 26.0067   Low
cufflinks 8.83703 0.0 39.2946    
cufflinks 10.8866 0.0 44.5237    
cufflinks 0.444       Low
cufflinks 0.732        
cufflinks 0.701        
cufflinks 0.665        
cufflinks 0.508       Low
cufflinks 0.655        
cufflinks 0.597        
cufflinks 0.813       High
cufflinks 0.69        
cufflinks 0.547        
cufflinks 0.559        
cufflinks 0.704        
cufflinks 0.597        
cufflinks 0.729        
cufflinks 0.905       High
cufflinks 0.553        
cufflinks 1.029       High

0 Strain