Gene : Glyma.19G253300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  2533
Name:  ? Glyma.19G253300 Secondary Identifier:  ? PAC:30511629
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5695 Glycine max pathologic  
Gmax PWY-6608 Glycine max pathologic  
Gmax PWY-6609 Glycine max pathologic  
Gmax PWY-7179 Glycine max pathologic  
Gmax SALVADEHYPOX-PWY Glycine max pathologic  
Gmax URSIN-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G253300 0.5kb upstream 0.5kb upstream 7564 true Chr19: 49856942-49864505 Glycine max
Glyma.19G253300 0.5kb upstream 0.5kb upstream 500 false Chr19: 49864006-49864505 Glycine max
Glyma.19G253300 0.5kb downstream 0.5kb downstream 7564 true Chr19: 49856442-49864005 Glycine max
Glyma.19G253300 0.5kb downstream 0.5kb downstream 500 false Chr19: 49856442-49856941 Glycine max
Glyma.19G253300 1.0kb upstream 1.0kb upstream 8064 true Chr19: 49856942-49865005 Glycine max
Glyma.19G253300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49864006-49865005 Glycine max
Glyma.19G253300 1.0kb downstream 1.0kb downstream 8064 true Chr19: 49855942-49864005 Glycine max
Glyma.19G253300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49855942-49856941 Glycine max
Glyma.19G253300 2.0kb upstream 2.0kb upstream 9064 true Chr19: 49856942-49866005 Glycine max
Glyma.19G253300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49864006-49866005 Glycine max
Glyma.19G253300 2.0kb downstream 2.0kb downstream 9064 true Chr19: 49854942-49864005 Glycine max
Glyma.19G253300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49854942-49856941 Glycine max
Glyma.19G253300 5.0kb upstream 5.0kb upstream 12064 true Chr19: 49856942-49869005 Glycine max
Glyma.19G253300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49864006-49869005 Glycine max
Glyma.19G253300 5.0kb downstream 5.0kb downstream 12064 true Chr19: 49851942-49864005 Glycine max
Glyma.19G253300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49851942-49856941 Glycine max
Glyma.19G253300 10.0kb upstream 10.0kb upstream 17064 true Chr19: 49856942-49874005 Glycine max
Glyma.19G253300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49864006-49874005 Glycine max
Glyma.19G253300 10.0kb downstream 10.0kb downstream 17064 true Chr19: 49846942-49864005 Glycine max
Glyma.19G253300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49846942-49856941 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299558 5265 Fabidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.70258 0.0 16.5755   Low
cufflinks 19.4203 0.0 58.924    
cufflinks 8.11667 0.0 25.3042    
cufflinks 15.4704 0.0 48.137    
cufflinks 13.3863 0.0 41.2517    
cufflinks 12.4101 0.0 38.4796    
cufflinks 16.3952 0.0 56.3581    
cufflinks 20.894 0.0 63.2481   High
cufflinks 11.9483 0.0 37.7108    
cufflinks 2.621       High
cufflinks 0.778       Low
cufflinks 1.592        
cufflinks 2.555       High
cufflinks 3.157       High
cufflinks 0.62       Low
cufflinks 1.565        
cufflinks 1.016        
cufflinks 1.86        
cufflinks 3.113       High
cufflinks 1.211        
cufflinks 1.167        
cufflinks 1.356        
cufflinks 2.119        
cufflinks 1.35        
cufflinks 1.329        
cufflinks 1.079        

0 Strain