Gene : Glyma.19G254100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33978:SF2 - EXPRESSED PROTEIN Genomic Order:  2541
Name:  ? Glyma.19G254100 Secondary Identifier:  ? PAC:30512014
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G254100 0.5kb upstream 0.5kb upstream 821 true Chr19: 49903038-49903858 Glycine max
Glyma.19G254100 0.5kb upstream 0.5kb upstream 500 false Chr19: 49903038-49903537 Glycine max
Glyma.19G254100 0.5kb downstream 0.5kb downstream 821 true Chr19: 49903538-49904358 Glycine max
Glyma.19G254100 0.5kb downstream 0.5kb downstream 500 false Chr19: 49903859-49904358 Glycine max
Glyma.19G254100 1.0kb upstream 1.0kb upstream 1321 true Chr19: 49902538-49903858 Glycine max
Glyma.19G254100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49902538-49903537 Glycine max
Glyma.19G254100 1.0kb downstream 1.0kb downstream 1321 true Chr19: 49903538-49904858 Glycine max
Glyma.19G254100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49903859-49904858 Glycine max
Glyma.19G254100 2.0kb upstream 2.0kb upstream 2321 true Chr19: 49901538-49903858 Glycine max
Glyma.19G254100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49901538-49903537 Glycine max
Glyma.19G254100 2.0kb downstream 2.0kb downstream 2321 true Chr19: 49903538-49905858 Glycine max
Glyma.19G254100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49903859-49905858 Glycine max
Glyma.19G254100 5.0kb upstream 5.0kb upstream 5321 true Chr19: 49898538-49903858 Glycine max
Glyma.19G254100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49898538-49903537 Glycine max
Glyma.19G254100 5.0kb downstream 5.0kb downstream 5321 true Chr19: 49903538-49908858 Glycine max
Glyma.19G254100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49903859-49908858 Glycine max
Glyma.19G254100 10.0kb upstream 10.0kb upstream 10321 true Chr19: 49893538-49903858 Glycine max
Glyma.19G254100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49893538-49903537 Glycine max
Glyma.19G254100 10.0kb downstream 10.0kb downstream 10321 true Chr19: 49903538-49913858 Glycine max
Glyma.19G254100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49903859-49913858 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122313823 5265 Fabidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.121223 0.0 0.54865 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.363        
cufflinks 0.044     Low Low
cufflinks 0.15        
cufflinks 0.075        
cufflinks 0.055        
cufflinks 0.058     Low  
cufflinks 1.515       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.106        
cufflinks 0.447        
cufflinks 0.048     Low Low
cufflinks 0.164        
cufflinks 0.602       High
cufflinks 0.045     Low Low
cufflinks 0.261        

0 Strain