Gene : Glyma.19G255600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12786:SF1 - PROTEIN SDE2 HOMOLOG Genomic Order:  2556
Name:  ? Glyma.19G255600 Secondary Identifier:  ? PAC:30512938
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G255600 0.5kb upstream 0.5kb upstream 4269 true Chr19: 50004264-50008532 Glycine max
Glyma.19G255600 0.5kb upstream 0.5kb upstream 500 false Chr19: 50004264-50004763 Glycine max
Glyma.19G255600 0.5kb downstream 0.5kb downstream 4269 true Chr19: 50004764-50009032 Glycine max
Glyma.19G255600 0.5kb downstream 0.5kb downstream 500 false Chr19: 50008533-50009032 Glycine max
Glyma.19G255600 1.0kb upstream 1.0kb upstream 4769 true Chr19: 50003764-50008532 Glycine max
Glyma.19G255600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 50003764-50004763 Glycine max
Glyma.19G255600 1.0kb downstream 1.0kb downstream 4769 true Chr19: 50004764-50009532 Glycine max
Glyma.19G255600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 50008533-50009532 Glycine max
Glyma.19G255600 2.0kb upstream 2.0kb upstream 5769 true Chr19: 50002764-50008532 Glycine max
Glyma.19G255600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 50002764-50004763 Glycine max
Glyma.19G255600 2.0kb downstream 2.0kb downstream 5769 true Chr19: 50004764-50010532 Glycine max
Glyma.19G255600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 50008533-50010532 Glycine max
Glyma.19G255600 5.0kb upstream 5.0kb upstream 8769 true Chr19: 49999764-50008532 Glycine max
Glyma.19G255600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49999764-50004763 Glycine max
Glyma.19G255600 5.0kb downstream 5.0kb downstream 8769 true Chr19: 50004764-50013532 Glycine max
Glyma.19G255600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 50008533-50013532 Glycine max
Glyma.19G255600 10.0kb upstream 10.0kb upstream 13769 true Chr19: 49994764-50008532 Glycine max
Glyma.19G255600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49994764-50004763 Glycine max
Glyma.19G255600 10.0kb downstream 10.0kb downstream 13769 true Chr19: 50004764-50018532 Glycine max
Glyma.19G255600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 50008533-50018532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299338 5265 Fabidae View MSA
124060916 5270 Rosid View MSA
123743945 5271 Pentapetalae View MSA
122790858 5272 Eudicot View MSA
122047648 5273 Angiosperm View MSA
121345169 5274 Embryophyte View MSA
123427367 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4534 0.0 58.8722   High
cufflinks 15.4818 0.0 55.3453    
cufflinks 13.5178 0.0 47.2019    
cufflinks 13.4561 0.0 44.7924    
cufflinks 14.8173 0.0 54.8281    
cufflinks 16.1588 0.0 69.539    
cufflinks 16.741 0.0 56.7561   High
cufflinks 12.8888 0.0 46.0671   Low
cufflinks 14.6198 0.0 54.3793    
cufflinks 6.62       Low
cufflinks 17.39     High High
cufflinks 8.612     High  
cufflinks 6.871       Low
cufflinks 6.672       Low
cufflinks 13.061     High  
cufflinks 12.57     High  
cufflinks 8.437     High  
cufflinks 7.855     High  
cufflinks 10.214     High  
cufflinks 14.808     High High
cufflinks 13.351     High  
cufflinks 13.56     High  
cufflinks 8.841     High  
cufflinks 16.784     High High
cufflinks 13.034     High  
cufflinks 10.842     High  

0 Strain