Gene : Glyma.19G256000 G. max Wm82.a2.v1

Defline:  (1 of 1) PTHR31446:SF4 - ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN Genomic Order:  2560
Name:  ? Glyma.19G256000 Secondary Identifier:  ? PAC:30511205

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G256000 0.5kb upstream 0.5kb upstream 3525 true Chr19: 50020815-50024339 Glycine max
Glyma.19G256000 0.5kb upstream 0.5kb upstream 500 false Chr19: 50020815-50021314 Glycine max
Glyma.19G256000 0.5kb downstream 0.5kb downstream 3525 true Chr19: 50021315-50024839 Glycine max
Glyma.19G256000 0.5kb downstream 0.5kb downstream 500 false Chr19: 50024340-50024839 Glycine max
Glyma.19G256000 1.0kb upstream 1.0kb upstream 4025 true Chr19: 50020315-50024339 Glycine max
Glyma.19G256000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 50020315-50021314 Glycine max
Glyma.19G256000 1.0kb downstream 1.0kb downstream 4025 true Chr19: 50021315-50025339 Glycine max
Glyma.19G256000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 50024340-50025339 Glycine max
Glyma.19G256000 2.0kb upstream 2.0kb upstream 5025 true Chr19: 50019315-50024339 Glycine max
Glyma.19G256000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 50019315-50021314 Glycine max
Glyma.19G256000 2.0kb downstream 2.0kb downstream 5025 true Chr19: 50021315-50026339 Glycine max
Glyma.19G256000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 50024340-50026339 Glycine max
Glyma.19G256000 5.0kb upstream 5.0kb upstream 8025 true Chr19: 50016315-50024339 Glycine max
Glyma.19G256000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 50016315-50021314 Glycine max
Glyma.19G256000 5.0kb downstream 5.0kb downstream 8025 true Chr19: 50021315-50029339 Glycine max
Glyma.19G256000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 50024340-50029339 Glycine max
Glyma.19G256000 10.0kb upstream 10.0kb upstream 13025 true Chr19: 50011315-50024339 Glycine max
Glyma.19G256000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 50011315-50021314 Glycine max
Glyma.19G256000 10.0kb downstream 10.0kb downstream 13025 true Chr19: 50021315-50034339 Glycine max
Glyma.19G256000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 50024340-50034339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310808 5265 Fabidae View MSA
124066733 5270 Rosid View MSA
123749818 5271 Pentapetalae View MSA
122786289 5272 Eudicot View MSA
122043661 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121346257 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.17387 0.0 21.2042   High
cufflinks 2.53752 0.0 8.63561    
cufflinks 2.64316 0.0 8.96756    
cufflinks 4.02995 0.0 12.8978    
cufflinks 1.6144 0.0 5.70867    
cufflinks 0.600622 0.0 2.25357   Low
cufflinks 1.39232 0.0 4.979    
cufflinks 1.85046 0.0 6.47747    
cufflinks 1.28279 0.0 4.61616    
cufflinks 0.918        
cufflinks 0.383        
cufflinks 0.897        
cufflinks 0.276       Low
cufflinks 0.351        
cufflinks 0.168       Low
cufflinks 2.203       High
cufflinks 0.264       Low
cufflinks 0.964        
cufflinks 0.78        
cufflinks 2.365       High
cufflinks 0.418        
cufflinks 2.374       High
cufflinks 2.387       High
cufflinks 0.368        
cufflinks 2.43       High
cufflinks 0.33        

0 Strain