Gene : Glyma.19G248200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  2482
Name:  ? Glyma.19G248200 Secondary Identifier:  ? PAC:30515152
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G248200 0.5kb upstream 0.5kb upstream 5622 true Chr19: 49422198-49427819 Glycine max
Glyma.19G248200 0.5kb upstream 0.5kb upstream 500 false Chr19: 49422198-49422697 Glycine max
Glyma.19G248200 0.5kb downstream 0.5kb downstream 5622 true Chr19: 49422698-49428319 Glycine max
Glyma.19G248200 0.5kb downstream 0.5kb downstream 500 false Chr19: 49427820-49428319 Glycine max
Glyma.19G248200 1.0kb upstream 1.0kb upstream 6122 true Chr19: 49421698-49427819 Glycine max
Glyma.19G248200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49421698-49422697 Glycine max
Glyma.19G248200 1.0kb downstream 1.0kb downstream 6122 true Chr19: 49422698-49428819 Glycine max
Glyma.19G248200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49427820-49428819 Glycine max
Glyma.19G248200 2.0kb upstream 2.0kb upstream 7122 true Chr19: 49420698-49427819 Glycine max
Glyma.19G248200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49420698-49422697 Glycine max
Glyma.19G248200 2.0kb downstream 2.0kb downstream 7122 true Chr19: 49422698-49429819 Glycine max
Glyma.19G248200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49427820-49429819 Glycine max
Glyma.19G248200 5.0kb upstream 5.0kb upstream 10122 true Chr19: 49417698-49427819 Glycine max
Glyma.19G248200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49417698-49422697 Glycine max
Glyma.19G248200 5.0kb downstream 5.0kb downstream 10122 true Chr19: 49422698-49432819 Glycine max
Glyma.19G248200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49427820-49432819 Glycine max
Glyma.19G248200 10.0kb upstream 10.0kb upstream 15122 true Chr19: 49412698-49427819 Glycine max
Glyma.19G248200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49412698-49422697 Glycine max
Glyma.19G248200 10.0kb downstream 10.0kb downstream 15122 true Chr19: 49422698-49437819 Glycine max
Glyma.19G248200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49427820-49437819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308195 5265 Fabidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.433 0.0 54.8869   High
cufflinks 12.4876 0.0 34.5413    
cufflinks 5.87139 0.0 17.7392   Low
cufflinks 8.09707 0.0 23.4066    
cufflinks 10.7597 0.0 30.1776    
cufflinks 7.42182 0.0 21.7243    
cufflinks 13.518 0.0 37.2349    
cufflinks 11.2729 0.0 31.4451    
cufflinks 9.20619 0.0 26.2443    
cufflinks 2.17        
cufflinks 0.535       Low
cufflinks 1.967        
cufflinks 2.425        
cufflinks 2.73        
cufflinks 0.852       Low
cufflinks 2.581        
cufflinks 1.123        
cufflinks 2.338        
cufflinks 3.105        
cufflinks 2.689        
cufflinks 0.917       Low
cufflinks 2.833        
cufflinks 4.224       High
cufflinks 0.881       Low
cufflinks 2.762        
cufflinks 0.781       Low

0 Strain