Gene : Glyma.19G249400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14190 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Genomic Order:  2494
Name:  ? Glyma.19G249400 Secondary Identifier:  ? PAC:30514712
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G249400 0.5kb upstream 0.5kb upstream 10225 true Chr19: 49534559-49544783 Glycine max
Glyma.19G249400 0.5kb upstream 0.5kb upstream 500 false Chr19: 49544284-49544783 Glycine max
Glyma.19G249400 0.5kb downstream 0.5kb downstream 10225 true Chr19: 49534059-49544283 Glycine max
Glyma.19G249400 0.5kb downstream 0.5kb downstream 500 false Chr19: 49534059-49534558 Glycine max
Glyma.19G249400 1.0kb upstream 1.0kb upstream 10725 true Chr19: 49534559-49545283 Glycine max
Glyma.19G249400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49544284-49545283 Glycine max
Glyma.19G249400 1.0kb downstream 1.0kb downstream 10725 true Chr19: 49533559-49544283 Glycine max
Glyma.19G249400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49533559-49534558 Glycine max
Glyma.19G249400 2.0kb upstream 2.0kb upstream 11725 true Chr19: 49534559-49546283 Glycine max
Glyma.19G249400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49544284-49546283 Glycine max
Glyma.19G249400 2.0kb downstream 2.0kb downstream 11725 true Chr19: 49532559-49544283 Glycine max
Glyma.19G249400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49532559-49534558 Glycine max
Glyma.19G249400 5.0kb upstream 5.0kb upstream 14725 true Chr19: 49534559-49549283 Glycine max
Glyma.19G249400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49544284-49549283 Glycine max
Glyma.19G249400 5.0kb downstream 5.0kb downstream 14725 true Chr19: 49529559-49544283 Glycine max
Glyma.19G249400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49529559-49534558 Glycine max
Glyma.19G249400 10.0kb upstream 10.0kb upstream 19725 true Chr19: 49534559-49554283 Glycine max
Glyma.19G249400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49544284-49554283 Glycine max
Glyma.19G249400 10.0kb downstream 10.0kb downstream 19725 true Chr19: 49524559-49544283 Glycine max
Glyma.19G249400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49524559-49534558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305451 5265 Fabidae View MSA
124065275 5270 Rosid View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.40273 0.0 20.0451   Low
cufflinks 8.74614 0.0 23.4819    
cufflinks 8.92364 0.0 23.9194    
cufflinks 11.7149 0.0 31.2607   High
cufflinks 10.2165 0.0 27.3351    
cufflinks 11.0456 0.0 29.4974    
cufflinks 9.65517 0.0 25.8772    
cufflinks 10.7227 0.0 28.644    
cufflinks 9.38367 0.0 25.1495    
cufflinks 3.09        
cufflinks 0.644       Low
cufflinks 2.689        
cufflinks 3.886       High
cufflinks 3.951       High
cufflinks 0.844       Low
cufflinks 2.21        
cufflinks 0.957       Low
cufflinks 3.207        
cufflinks 2.746        
cufflinks 2.031        
cufflinks 1.097        
cufflinks 2.151        
cufflinks 1.847        
cufflinks 1.081        
cufflinks 1.986        
cufflinks 1.499        

0 Strain