Gene : Glyma.19G250700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23315//PTHR23315:SF80 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Genomic Order:  2507
Name:  ? Glyma.19G250700 Secondary Identifier:  ? PAC:30513709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G250700 0.5kb upstream 0.5kb upstream 2383 true Chr19: 49669166-49671548 Glycine max
Glyma.19G250700 0.5kb upstream 0.5kb upstream 500 false Chr19: 49669166-49669665 Glycine max
Glyma.19G250700 0.5kb downstream 0.5kb downstream 2383 true Chr19: 49669666-49672048 Glycine max
Glyma.19G250700 0.5kb downstream 0.5kb downstream 500 false Chr19: 49671549-49672048 Glycine max
Glyma.19G250700 1.0kb upstream 1.0kb upstream 2883 true Chr19: 49668666-49671548 Glycine max
Glyma.19G250700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49668666-49669665 Glycine max
Glyma.19G250700 1.0kb downstream 1.0kb downstream 2883 true Chr19: 49669666-49672548 Glycine max
Glyma.19G250700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49671549-49672548 Glycine max
Glyma.19G250700 2.0kb upstream 2.0kb upstream 3883 true Chr19: 49667666-49671548 Glycine max
Glyma.19G250700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49667666-49669665 Glycine max
Glyma.19G250700 2.0kb downstream 2.0kb downstream 3883 true Chr19: 49669666-49673548 Glycine max
Glyma.19G250700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49671549-49673548 Glycine max
Glyma.19G250700 5.0kb upstream 5.0kb upstream 6883 true Chr19: 49664666-49671548 Glycine max
Glyma.19G250700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49664666-49669665 Glycine max
Glyma.19G250700 5.0kb downstream 5.0kb downstream 6883 true Chr19: 49669666-49676548 Glycine max
Glyma.19G250700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49671549-49676548 Glycine max
Glyma.19G250700 10.0kb upstream 10.0kb upstream 11883 true Chr19: 49659666-49671548 Glycine max
Glyma.19G250700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49659666-49669665 Glycine max
Glyma.19G250700 10.0kb downstream 10.0kb downstream 11883 true Chr19: 49669666-49681548 Glycine max
Glyma.19G250700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49671549-49681548 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122301536 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24636 0.0 17.6765    
cufflinks 2.48212 0.0 7.96047   Low
cufflinks 1.72424 0.0 5.7936   Low
cufflinks 5.67975 0.0 16.2476    
cufflinks 4.86075 0.0 14.1497    
cufflinks 7.03538 0.0 19.6406    
cufflinks 5.4348 0.0 15.6208    
cufflinks 16.1469 0.0 43.1139   High
cufflinks 6.16095 0.0 17.4408    
cufflinks 19.77     High High
cufflinks 7.627     High  
cufflinks 2.446       Low
cufflinks 5.717        
cufflinks 2.222       Low
cufflinks 5.525     High  
cufflinks 12.135     High  
cufflinks 40.333     High High
cufflinks 2.733       Low
cufflinks 3.199       Low
cufflinks 13.457     High  
cufflinks 18.663     High High
cufflinks 12.907     High  
cufflinks 8.15     High  
cufflinks 8.469     High  
cufflinks 9.38     High  
cufflinks 12.868     High  

0 Strain