Gene : Glyma.19G251700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12416:SF2 - RRNA-PROCESSING PROTEIN FCF1 HOMOLOG Genomic Order:  2517
Name:  ? Glyma.19G251700 Secondary Identifier:  ? PAC:30512428
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G251700 0.5kb upstream 0.5kb upstream 5462 true Chr19: 49738901-49744362 Glycine max
Glyma.19G251700 0.5kb upstream 0.5kb upstream 500 false Chr19: 49743863-49744362 Glycine max
Glyma.19G251700 0.5kb downstream 0.5kb downstream 5462 true Chr19: 49738401-49743862 Glycine max
Glyma.19G251700 0.5kb downstream 0.5kb downstream 500 false Chr19: 49738401-49738900 Glycine max
Glyma.19G251700 1.0kb upstream 1.0kb upstream 5962 true Chr19: 49738901-49744862 Glycine max
Glyma.19G251700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49743863-49744862 Glycine max
Glyma.19G251700 1.0kb downstream 1.0kb downstream 5962 true Chr19: 49737901-49743862 Glycine max
Glyma.19G251700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49737901-49738900 Glycine max
Glyma.19G251700 2.0kb upstream 2.0kb upstream 6962 true Chr19: 49738901-49745862 Glycine max
Glyma.19G251700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49743863-49745862 Glycine max
Glyma.19G251700 2.0kb downstream 2.0kb downstream 6962 true Chr19: 49736901-49743862 Glycine max
Glyma.19G251700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49736901-49738900 Glycine max
Glyma.19G251700 5.0kb upstream 5.0kb upstream 9962 true Chr19: 49738901-49748862 Glycine max
Glyma.19G251700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49743863-49748862 Glycine max
Glyma.19G251700 5.0kb downstream 5.0kb downstream 9962 true Chr19: 49733901-49743862 Glycine max
Glyma.19G251700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49733901-49738900 Glycine max
Glyma.19G251700 10.0kb upstream 10.0kb upstream 14962 true Chr19: 49738901-49753862 Glycine max
Glyma.19G251700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49743863-49753862 Glycine max
Glyma.19G251700 10.0kb downstream 10.0kb downstream 14962 true Chr19: 49728901-49743862 Glycine max
Glyma.19G251700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49728901-49738900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658071 5273 Angiosperm View MSA
122247850 5265 Fabidae Singleton cluster - no MSA
124041039 5270 Rosid View MSA
123612104 5271 Pentapetalae View MSA
122646627 5272 Eudicot View MSA
120930087 5274 Embryophyte View MSA
122970626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0473622 0.0 0.230336 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0851794 0.0 0.373813 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.007     Low High
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain