Gene : Glyma.20G022500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11040:SF48 - ZINC TRANSPORTER 10-RELATED Genomic Order:  225
Name:  ? Glyma.20G022500 Secondary Identifier:  ? PAC:30520447
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G022500 0.5kb upstream 0.5kb upstream 10722 true Chr20: 2342443-2353164 Glycine max
Glyma.20G022500 0.5kb upstream 0.5kb upstream 500 false Chr20: 2342443-2342942 Glycine max
Glyma.20G022500 0.5kb downstream 0.5kb downstream 10722 true Chr20: 2342943-2353664 Glycine max
Glyma.20G022500 0.5kb downstream 0.5kb downstream 500 false Chr20: 2353165-2353664 Glycine max
Glyma.20G022500 1.0kb upstream 1.0kb upstream 11222 true Chr20: 2341943-2353164 Glycine max
Glyma.20G022500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2341943-2342942 Glycine max
Glyma.20G022500 1.0kb downstream 1.0kb downstream 11222 true Chr20: 2342943-2354164 Glycine max
Glyma.20G022500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2353165-2354164 Glycine max
Glyma.20G022500 2.0kb upstream 2.0kb upstream 12222 true Chr20: 2340943-2353164 Glycine max
Glyma.20G022500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2340943-2342942 Glycine max
Glyma.20G022500 2.0kb downstream 2.0kb downstream 12222 true Chr20: 2342943-2355164 Glycine max
Glyma.20G022500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2353165-2355164 Glycine max
Glyma.20G022500 5.0kb upstream 5.0kb upstream 15222 true Chr20: 2337943-2353164 Glycine max
Glyma.20G022500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2337943-2342942 Glycine max
Glyma.20G022500 5.0kb downstream 5.0kb downstream 15222 true Chr20: 2342943-2358164 Glycine max
Glyma.20G022500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2353165-2358164 Glycine max
Glyma.20G022500 10.0kb upstream 10.0kb upstream 20222 true Chr20: 2332943-2353164 Glycine max
Glyma.20G022500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2332943-2342942 Glycine max
Glyma.20G022500 10.0kb downstream 10.0kb downstream 20222 true Chr20: 2342943-2363164 Glycine max
Glyma.20G022500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2353165-2363164 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305267 5265 Fabidae View MSA
124068612 5270 Rosid View MSA
123743526 5271 Pentapetalae View MSA
122794110 5272 Eudicot View MSA
122043249 5273 Angiosperm View MSA
121310094 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02687 0.0 3.66848    
cufflinks 1.41847 0.0 4.93409    
cufflinks 0.616078 0.0 2.26995    
cufflinks 0.523911 0.0 1.94655    
cufflinks 60.3539 0.0 171.091 High High
cufflinks 0.450791 0.0 1.68665    
cufflinks 0.201382 0.0 0.781197 Low Low
cufflinks 0.656284 0.0 2.40951    
cufflinks 10.9681 0.0 29.8681   High
cufflinks 0.069     Low  
cufflinks 0.14        
cufflinks 0.086     Low  
cufflinks 0.012     Low Low
cufflinks 0.006     Low Low
cufflinks 0.009     Low Low
cufflinks 0.482        
cufflinks 3.888       High
cufflinks 0.165        
cufflinks 0.281        
cufflinks 0.465        
cufflinks 0.103        
cufflinks 0.495        
cufflinks 0.936        
cufflinks 0.039     Low  
cufflinks 0.466        
cufflinks 15.866     High High

0 Strain