Gene : Glyma.20G023900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR17985 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  239
Name:  ? Glyma.20G023900 Secondary Identifier:  ? PAC:30519488
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G023900 0.5kb upstream 0.5kb upstream 6055 true Chr20: 2595984-2602038 Glycine max
Glyma.20G023900 0.5kb upstream 0.5kb upstream 500 false Chr20: 2601539-2602038 Glycine max
Glyma.20G023900 0.5kb downstream 0.5kb downstream 6055 true Chr20: 2595484-2601538 Glycine max
Glyma.20G023900 0.5kb downstream 0.5kb downstream 500 false Chr20: 2595484-2595983 Glycine max
Glyma.20G023900 1.0kb upstream 1.0kb upstream 6555 true Chr20: 2595984-2602538 Glycine max
Glyma.20G023900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2601539-2602538 Glycine max
Glyma.20G023900 1.0kb downstream 1.0kb downstream 6555 true Chr20: 2594984-2601538 Glycine max
Glyma.20G023900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2594984-2595983 Glycine max
Glyma.20G023900 2.0kb upstream 2.0kb upstream 7555 true Chr20: 2595984-2603538 Glycine max
Glyma.20G023900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2601539-2603538 Glycine max
Glyma.20G023900 2.0kb downstream 2.0kb downstream 7555 true Chr20: 2593984-2601538 Glycine max
Glyma.20G023900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2593984-2595983 Glycine max
Glyma.20G023900 5.0kb upstream 5.0kb upstream 10555 true Chr20: 2595984-2606538 Glycine max
Glyma.20G023900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2601539-2606538 Glycine max
Glyma.20G023900 5.0kb downstream 5.0kb downstream 10555 true Chr20: 2590984-2601538 Glycine max
Glyma.20G023900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2590984-2595983 Glycine max
Glyma.20G023900 10.0kb upstream 10.0kb upstream 15555 true Chr20: 2595984-2611538 Glycine max
Glyma.20G023900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2601539-2611538 Glycine max
Glyma.20G023900 10.0kb downstream 10.0kb downstream 15555 true Chr20: 2585984-2601538 Glycine max
Glyma.20G023900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2585984-2595983 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312617 5265 Fabidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17575 0.0 18.4923   High
cufflinks 3.48462 0.0 12.0476    
cufflinks 1.3718 0.0 6.00286    
cufflinks 2.46547 0.0 9.24093    
cufflinks 2.23853 0.0 8.82267    
cufflinks 1.23198 0.0 5.52324   Low
cufflinks 1.51644 0.0 6.64235    
cufflinks 5.79058 0.0 22.4059   High
cufflinks 1.45387 0.0 6.3808    
cufflinks 0.314       High
cufflinks 0.033     Low Low
cufflinks 0.171        
cufflinks 0.128        
cufflinks 0.169        
cufflinks 0.02     Low Low
cufflinks 0.162        
cufflinks 0.04     Low Low
cufflinks 0.163        
cufflinks 0.187        
cufflinks 0.185        
cufflinks 0.038     Low Low
cufflinks 0.197        
cufflinks 0.146        
cufflinks 0.048     Low  
cufflinks 0.167        
cufflinks 0.036     Low Low

0 Strain