Gene : Glyma.20G024800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11817:SF5 - PYRUVATE KINASE-RELATED Genomic Order:  248
Name:  ? Glyma.20G024800 Secondary Identifier:  ? PAC:30523392
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G024800 0.5kb upstream 0.5kb upstream 3952 true Chr20: 2679071-2683022 Glycine max
Glyma.20G024800 0.5kb upstream 0.5kb upstream 500 false Chr20: 2679071-2679570 Glycine max
Glyma.20G024800 0.5kb downstream 0.5kb downstream 3952 true Chr20: 2679571-2683522 Glycine max
Glyma.20G024800 0.5kb downstream 0.5kb downstream 500 false Chr20: 2683023-2683522 Glycine max
Glyma.20G024800 1.0kb upstream 1.0kb upstream 4452 true Chr20: 2678571-2683022 Glycine max
Glyma.20G024800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2678571-2679570 Glycine max
Glyma.20G024800 1.0kb downstream 1.0kb downstream 4452 true Chr20: 2679571-2684022 Glycine max
Glyma.20G024800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2683023-2684022 Glycine max
Glyma.20G024800 2.0kb upstream 2.0kb upstream 5452 true Chr20: 2677571-2683022 Glycine max
Glyma.20G024800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2677571-2679570 Glycine max
Glyma.20G024800 2.0kb downstream 2.0kb downstream 5452 true Chr20: 2679571-2685022 Glycine max
Glyma.20G024800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2683023-2685022 Glycine max
Glyma.20G024800 5.0kb upstream 5.0kb upstream 8452 true Chr20: 2674571-2683022 Glycine max
Glyma.20G024800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2674571-2679570 Glycine max
Glyma.20G024800 5.0kb downstream 5.0kb downstream 8452 true Chr20: 2679571-2688022 Glycine max
Glyma.20G024800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2683023-2688022 Glycine max
Glyma.20G024800 10.0kb upstream 10.0kb upstream 13452 true Chr20: 2669571-2683022 Glycine max
Glyma.20G024800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2669571-2679570 Glycine max
Glyma.20G024800 10.0kb downstream 10.0kb downstream 13452 true Chr20: 2679571-2693022 Glycine max
Glyma.20G024800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2683023-2693022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301531 5265 Fabidae View MSA
124068384 5270 Rosid View MSA
123737970 5271 Pentapetalae View MSA
122792873 5272 Eudicot View MSA
122044181 5273 Angiosperm View MSA
121310247 5274 Embryophyte View MSA
123427047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4815 0.0 55.0275    
cufflinks 17.8537 0.0 47.7383    
cufflinks 11.4786 0.0 30.7033   Low
cufflinks 24.77 0.0 67.152 High  
cufflinks 42.3023 0.0 120.632 High High
cufflinks 48.6514 0.0 141.115 High High
cufflinks 9.13946 0.0 24.6206   Low
cufflinks 20.7274 0.0 55.7093    
cufflinks 20.7161 0.0 55.6707 High  
cufflinks 12.569     High  
cufflinks 10.015     High  
cufflinks 11.151     High  
cufflinks 30.392     High High
cufflinks 40.521     High High
cufflinks 4.869       Low
cufflinks 10.809     High  
cufflinks 10.883     High  
cufflinks 12.72     High  
cufflinks 14.18     High  
cufflinks 11.702     High  
cufflinks 13.239     High  
cufflinks 10.608     High  
cufflinks 11.486     High  
cufflinks 13.717     High  
cufflinks 10.527     High  
cufflinks 14.498     High  

0 Strain