Gene : Glyma.20G019200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11800:SF2 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 Genomic Order:  192
Name:  ? Glyma.20G019200 Secondary Identifier:  ? PAC:30521626
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G019200 0.5kb upstream 0.5kb upstream 4967 true Chr20: 1993532-1998498 Glycine max
Glyma.20G019200 0.5kb upstream 0.5kb upstream 500 false Chr20: 1993532-1994031 Glycine max
Glyma.20G019200 0.5kb downstream 0.5kb downstream 4967 true Chr20: 1994032-1998998 Glycine max
Glyma.20G019200 0.5kb downstream 0.5kb downstream 500 false Chr20: 1998499-1998998 Glycine max
Glyma.20G019200 1.0kb upstream 1.0kb upstream 5467 true Chr20: 1993032-1998498 Glycine max
Glyma.20G019200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 1993032-1994031 Glycine max
Glyma.20G019200 1.0kb downstream 1.0kb downstream 5467 true Chr20: 1994032-1999498 Glycine max
Glyma.20G019200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 1998499-1999498 Glycine max
Glyma.20G019200 2.0kb upstream 2.0kb upstream 6467 true Chr20: 1992032-1998498 Glycine max
Glyma.20G019200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 1992032-1994031 Glycine max
Glyma.20G019200 2.0kb downstream 2.0kb downstream 6467 true Chr20: 1994032-2000498 Glycine max
Glyma.20G019200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 1998499-2000498 Glycine max
Glyma.20G019200 5.0kb upstream 5.0kb upstream 9467 true Chr20: 1989032-1998498 Glycine max
Glyma.20G019200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 1989032-1994031 Glycine max
Glyma.20G019200 5.0kb downstream 5.0kb downstream 9467 true Chr20: 1994032-2003498 Glycine max
Glyma.20G019200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 1998499-2003498 Glycine max
Glyma.20G019200 10.0kb upstream 10.0kb upstream 14467 true Chr20: 1984032-1998498 Glycine max
Glyma.20G019200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 1984032-1994031 Glycine max
Glyma.20G019200 10.0kb downstream 10.0kb downstream 14467 true Chr20: 1994032-2008498 Glycine max
Glyma.20G019200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 1998499-2008498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301418 5265 Fabidae View MSA
124066500 5270 Rosid View MSA
123743057 5271 Pentapetalae View MSA
122793148 5272 Eudicot View MSA
122045385 5273 Angiosperm View MSA
121347038 5274 Embryophyte View MSA
123424070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5799 0.0 18.3153    
cufflinks 7.2275 0.0 19.975    
cufflinks 2.3977 0.0 7.58618   Low
cufflinks 7.90671 0.0 21.6799    
cufflinks 6.84064 0.0 18.9416    
cufflinks 6.56937 0.0 18.2783    
cufflinks 8.24436 0.0 22.5521    
cufflinks 7.23029 0.0 19.9808    
cufflinks 6.20651 0.0 17.362    
cufflinks 2.085        
cufflinks 0.548       Low
cufflinks 1.849        
cufflinks 3.187       High
cufflinks 3.46       High
cufflinks 0.707       Low
cufflinks 2.226        
cufflinks 1.695        
cufflinks 1.863        
cufflinks 3.666       High
cufflinks 1.192        
cufflinks 0.986        
cufflinks 1.606        
cufflinks 2.114        
cufflinks 0.918       Low
cufflinks 1.601        
cufflinks 1.679        

0 Strain